Entity Name	Entity type	Gene Symbol	Sources(; separated)	Level4	Level3	Level2	Model_Of_Inheritance	Phenotypes	Omim	Orphanet	HPO	Publications	Description	Flagged	GEL_Status	UserRatings_Green_amber_red	version	ready	Mode of pathogenicity	EnsemblId(GRch37)	EnsemblId(GRch38)	HGNC	Position Chromosome	Position GRCh37 Start	Position GRCh37 End	Position GRCh38 Start	Position GRCh38 End	STR Repeated Sequence	STR Normal Repeats	STR Pathogenic Repeats	Region Haploinsufficiency Score	Region Triplosensitivity Score	Region Required Overlap Percentage	Region Variant Type	Region Verbose Name
ABCD1	gene	ABCD1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)	spastic paraparesis;Hereditary spastic paraplegia;Adrenoleukodystrophy, 300100;VLCFA accumulation;adrenal failure			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000101986	ENSG00000101986	HGNC:61													
ALDH18A1	gene	ALDH18A1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Spastic paraplegia 9B, autosomal recessive, MIM# 616586;Spastic paraplegia 9A, autosomal dominant, MIM# 601162			Spasticity;HP:0001257	26026163;29915212		False	3	100;0;0	1.19	True		ENSG00000059573	ENSG00000059573	HGNC:9722													
AP5Z1	gene	AP5Z1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 48, autosomal recessive, MIM# 613647;MONDO:0013342			Spasticity;HP:0001257	26085577;33543803;27606357		False	3	100;0;0	1.19	True		ENSG00000242802	ENSG00000242802	HGNC:22197													
ATL1	gene	ATL1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Spastic paraplegia 3A, MIM 182600;Hereditary spastic paraplegia, AR			Spasticity;HP:0001257	16401858;16537571;17657515;28396731;24473461;26888483		False	3	100;0;0	1.19	True		ENSG00000198513	ENSG00000198513	HGNC:11231													
ATP13A2	gene	ATP13A2	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 78, autosomal recessive, 617225;Kufor-Rakeb syndrome, 606693 AR;complicated hereditary spastic paraplegia;Adult-onset lower-limb predominant spastic paraparesis			Spasticity;HP:0001257	27217339;28137957		False	3	100;0;0	1.19	True		ENSG00000159363	ENSG00000159363	HGNC:30213													
B4GALNT1	gene	B4GALNT1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 26, autosomal recessive, 609195			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000135454	ENSG00000135454	HGNC:4117													
BSCL2	gene	BSCL2	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Silver spastic paraplegia syndrome, 270685;HSP 17, MONDO:0010043			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000168000	ENSG00000168000	HGNC:15832													
C19orf12	gene	C19orf12	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	"Neurodegeneration with brain iron accumulation 4, MIM#	614298;Spastic paraplegia 43, autosomal recessive, MIM#	615043"			Spasticity;HP:0001257	20039086;21981780;23269600;31087512		False	3	100;0;0	1.19	True		ENSG00000131943	ENSG00000131943	HGNC:25443													
CAPN1	gene	CAPN1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 76 autosomal recessive, 616907;MONDO:0014827			Spasticity;HP:0001257	27153400		False	3	100;0;0	1.19	True		ENSG00000014216	ENSG00000014216	HGNC:1476													
CYP27A1	gene	CYP27A1	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Cerebrotendinous xanthomatosis, 213700;MONDO:0008948;progressive lower extremity spasticity,often disproportionate to any degree of weakness			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000135929	ENSG00000135929	HGNC:2605													
CYP7B1	gene	CYP7B1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 5A, autosomal recessive, 270800;MONDO:0010047			Spasticity;HP:0001257	19439420;18252231		False	3	100;0;0	1.19	True		ENSG00000172817	ENSG00000172817	HGNC:2652													
DARS	gene	DARS	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Brain stem and spinal cord Hypomyelination;leg spasticity;Hypomyelination with brainstem and spinal cord involvement and leg spasticity, 615281			Spasticity;HP:0001257	25527264;23643384		False	3	100;0;0	1.19	True		ENSG00000115866	ENSG00000115866	HGNC:2678													
DDHD1	gene	DDHD1	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Hereditary spastic paraplegia 28, MONDO:0012256			Spasticity;HP:0001257	15786464, 23176821, 24989667, 27216551, 26944165, 28818478, 29980238, 27999540, 33600578		False	3	100;0;0	1.19	True		ENSG00000100523	ENSG00000100523	HGNC:19714													
DDHD2	gene	DDHD2	Expert Review Green;Literature	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 54, autosomal recessive, MIM# 615033;MONDO:0014018			Spasticity;HP:0001257	23486545;24482476;23176823;31302745		False	3	100;0;0	1.19	True		ENSG00000085788	ENSG00000085788	HGNC:29106													
ERLIN2	gene	ERLIN2	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 18, autosomal recessive, MIM# 611225;Spastic paraplegia 18A, autosomal dominant, MIM# 620512			Spasticity;HP:0001257	23109145;21330303;32094424;29528531		False	3	100;0;0	1.19	True		ENSG00000147475	ENSG00000147475	HGNC:1356													
FA2H	gene	FA2H	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 35, autosomal recessive, 611026;MONDO:0012866			Spasticity;HP:0001257	20104589;23745665;19068277;20853438;22146942;30446360		False	3	100;0;0	1.19	True		ENSG00000103089	ENSG00000103089	HGNC:21197													
FBXO7	gene	FBXO7	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Parkinson disease 15, autosomal recessive MIM#260300			Spasticity;HP:0001257	18513678;19038853		False	3	100;0;0	1.19	True		ENSG00000100225	ENSG00000100225	HGNC:13586													
FXN	gene	FXN	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Friedreich ataxia, 229300			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000165060	ENSG00000165060	HGNC:3951													
GALC	gene	GALC	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Krabbe disease MIM#245200			Spasticity;HP:0001257	9272171;11971051;22959700;26396125;26915362;28547031;31185936;32064984		False	3	100;0;0	1.19	True		ENSG00000054983	ENSG00000054983	HGNC:4115													
GBA2	gene	GBA2	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 46, autosomal recessive, 614409;MONDO:0013737			Spasticity;HP:0001257	23332916;23332917;29524657		False	3	100;0;0	1.19	True		ENSG00000070610	ENSG00000070610	HGNC:18986													
GBE1	gene	GBE1	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Polyglucosan body disease, adult form MIM#263570			Spasticity;HP:0001257	23034915		False	3	100;0;0	1.19	True		ENSG00000114480	ENSG00000114480	HGNC:4180													
GCH1	gene	GCH1	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	"Dystonia, DOPA-responsive, with or without hyperphenylalaninemia, MIM#	128230"			Spasticity;HP:0001257	21935284;24509643		False	3	100;0;0	1.19	True		ENSG00000131979	ENSG00000131979	HGNC:4193													
GFAP	gene	GFAP	Expert Review Green;Literature	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Alexander disease MONDO:0008752			Spasticity;HP:0001257	11138011;18684770		False	3	100;0;0	1.19	True	Other	ENSG00000131095	ENSG00000131095	HGNC:4235													
GJA1	gene	GJA1	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Hereditary spastic paraplegia;Oculodentodigital dysplasia, 164200, Oculodentodigital dysplasia, autosomal recessive, 257850			Spasticity;HP:0001257	31023660		False	3	100;0;0	1.19	True		ENSG00000152661	ENSG00000152661	HGNC:4274													
KCNA2	gene	KCNA2	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Hereditary spastic paraplegia and ataxia			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000177301	ENSG00000177301	HGNC:6220													
KIF1A	gene	KIF1A	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Spastic paraplegia 30, autosomal dominant MIM# 610357;Spastic paraplegia 30, autosomal recessive 620607			Spasticity;HP:0001257	26410750;21487076;22258533;32096284;31488895;29159194;25585697		False	3	100;0;0	1.19	True		ENSG00000130294	ENSG00000130294	HGNC:888													
KIF5A	gene	KIF5A	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Spastic paraplegia 10, autosomal dominant, MIM# 604187			Spasticity;HP:0001257	16489470;21623771;15452312;18853458;16476820		False	3	100;0;0	1.19	True		ENSG00000155980	ENSG00000155980	HGNC:6323													
NIPA1	gene	NIPA1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 6, autosomal dominant, MIM# 600363;MONDO:0010878			Spasticity;HP:0001257	14508710;15711826;32500351;25133278		False	3	100;0;0	1.19	True		ENSG00000170113	ENSG00000170113	HGNC:17043													
NOTCH1	gene	NOTCH1	Expert Review Green;Literature	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Genetic cerebral small vessel disease (MONDO:0018787), NOTCH1-related			Spasticity;HP:0001257	35947102		False	3	100;0;0	1.19	True	Other	ENSG00000148400	ENSG00000148400	HGNC:7881													
OPA3	gene	OPA3	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	3-methylglutaconic aciduria, type III, MIM# 258501			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000125741	ENSG00000125741	HGNC:8142													
PCYT2	gene	PCYT2	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	"Spastic paraplegia 82, autosomal recessive, MIM#	618770;global developmental delay;regression;spastic parapesis or tetraparesis;epilepsy;progressive cerebral and cerebellar atrophy"			Spasticity;HP:0001257	31637422		False	3	100;0;0	1.19	True		ENSG00000185813	ENSG00000185813	HGNC:8756													
PLP1	gene	PLP1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Spastic paraplegia 2, X-linked recessive, 312920			Spasticity;HP:0001257	15627202;8012387		False	3	100;0;0	1.19	True		ENSG00000123560	ENSG00000123560	HGNC:9086													
PNPLA6	gene	PNPLA6	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 39, autosomal recessive, 612020			Spasticity;HP:0001257	18313024		False	3	100;0;0	1.19	True		ENSG00000032444	ENSG00000032444	HGNC:16268													
POLR3A	gene	POLR3A	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic ataxia			Spasticity;HP:0001257	31637490		False	3	100;0;0	1.19	True		ENSG00000148606	ENSG00000148606	HGNC:30074													
PSEN1	gene	PSEN1	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Alzheimer disease, type 3, with spastic paraparesis and apraxia, MIM# 607822			Spasticity;HP:0001257	33274538		False	3	100;0;0	1.19	True		ENSG00000080815	ENSG00000080815	HGNC:9508													
REEP1	gene	REEP1	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 31, autosomal dominant, 610250;MONDO:0012453			Spasticity;HP:0001257	16826527;19034539		False	3	100;0;0	1.19	True		ENSG00000068615	ENSG00000068615	HGNC:25786													
RPS6KC1	gene	RPS6KC1	Expert Review Green;Literature	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Complex neurodevelopmental disorder, MONDO:0100038, RPS6KC1-related			Spasticity;HP:0001257	41130203		False	3	100;0;0	1.19	True		ENSG00000136643	ENSG00000136643	HGNC:10439													
RTN2	gene	RTN2	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 12, autosomal dominant, 604805;MONDO:0011489			Spasticity;HP:0001257	22232211;27165006		False	3	100;0;0	1.19	True		ENSG00000125744	ENSG00000125744	HGNC:10468													
SACS	gene	SACS	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic ataxia, Charlevoix-Saguenay type, 270550;MONDO:0010041			Spasticity;HP:0001257			False	3	100;0;0	1.19	True		ENSG00000151835	ENSG00000151835	HGNC:10519													
SLC25A15	gene	SLC25A15	Expert list;Expert Review Green	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Hyperornithinemia-hyperammonemia-homocitrullinemia syndrome MIM#238970			Spasticity;HP:0001257	16376511;22465082;28592010		False	3	100;0;0	1.19	True		ENSG00000102743	ENSG00000102743	HGNC:10985													
SPAST	gene	SPAST	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Spastic paraplegia 4, autosomal dominant, 182601			Spasticity;HP:0001257	30476002;30006150		False	3	100;0;0	1.19	True		ENSG00000021574	ENSG00000021574	HGNC:11233													
SPG11	gene	SPG11	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 11, autosomal recessive, MIM# 604360			Spasticity;HP:0001257	18067136		False	3	100;0;0	1.19	True		ENSG00000104133	ENSG00000104133	HGNC:11226													
SPG21	gene	SPG21	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Mast syndrome, 248900;Spastic Paraplegia, autosomal recessive			Spasticity;HP:0001257	14564668;24451228;28752238;26978163		False	3	100;0;0	1.19	True		ENSG00000090487	ENSG00000090487	HGNC:20373													
SPG7	gene	SPG7	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 7, autosomal recessive, 607259;MONDO:0011803			Spasticity;HP:0001257	22571692		False	3	100;0;0	1.19	True		ENSG00000197912	ENSG00000197912	HGNC:11237													
TUBA4A	gene	TUBA4A	Expert Review Green;Literature	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic ataxia 11, autosomal dominant, MIM# 621226			Spasticity;HP:0001257	38884572;37418012		False	3	100;0;0	1.19	True	Other	ENSG00000127824	ENSG00000127824	HGNC:12407													
UBAP1	gene	UBAP1	Expert Review Green;Literature;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 80, autosomal dominant 618418			Spasticity;HP:0001257	31696996;32934340		False	3	100;0;0	1.19	True	Other	ENSG00000165006	ENSG00000165006	HGNC:12461													
WASHC5	gene	WASHC5	Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 8, autosomal dominant, 603563;MONDO:0011339			Spasticity;HP:0001257	23455931;17160902;31814071;26572744		False	3	100;0;0	1.19	True		ENSG00000164961	ENSG00000164961	HGNC:28984													
ZFYVE26	gene	ZFYVE26	Expert list;Expert Review Green;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Spastic paraplegia 15, autosomal recessive, 270700;MONDO:0010044			Spasticity;HP:0001257	31385551		False	3	100;0;0	1.19	True		ENSG00000072121	ENSG00000072121	HGNC:20761													
ATP2B4	gene	ATP2B4	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Pure and complicated hereditary spastic paraplegia			Spasticity;HP:0001257	29691679;25798335;25119969		False	2	0;100;0	1.19	True		ENSG00000058668	ENSG00000058668	HGNC:817													
BICD2	gene	BICD2	Expert list;Expert Review Amber	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Spinal muscular atrophy, lower extremity-predominant, 2A, autosomal dominant, MIM#615290;Spinal muscular atrophy, lower extremity-predominant, 2B, autosomal dominant, MIM#618291			Spasticity;HP:0001257	23664120;25497877;24482476		False	2	0;100;0	1.19	True		ENSG00000185963	ENSG00000185963	HGNC:17208													
CPT1C	gene	CPT1C	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic paraplegia 73, autosomal dominant, MIM#616282;MONDO:0014568			Spasticity;HP:0001257	25751282;30911584;30564185;23973755;41312619		False	2	50;50;0	1.19	True		ENSG00000169169	ENSG00000169169	HGNC:18540													
GJC2	gene	GJC2	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Leukodystrophy, hypomyelinating, 2, 608804, AR;Spastic paraplegia 44, autosomal recessive 613206, AR			Spasticity;HP:0001257	19056803;23684670		False	2	0;100;0	1.19	True		ENSG00000198835	ENSG00000198835	HGNC:17494													
HSPD1	gene	HSPD1	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Spastic paraplegia 13, autosomal dominant, MIM# 605280			Spasticity;HP:0001257	26900593;11898127;17420924		False	2	0;100;0	1.19	True		ENSG00000144381	ENSG00000144381	HGNC:5261													
LYST	gene	LYST	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	spastic paraplegia;Spastic paraplegia;Chediak-Higashi syndrome, 214500			Spasticity;HP:0001257	26307451;24521565		False	2	0;100;0	1.19	True		ENSG00000143669	ENSG00000143669	HGNC:1968													
TUBB4A	gene	TUBB4A	Expert list;Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	ataxia;Leukodystrophy, hypomyelinating, 612438 AD;Dystonia 4, torsion, autosomal dominant, 128101			Spasticity;HP:0001257	23582646;24850488		False	2	0;100;0	1.19	True		ENSG00000104833	ENSG00000104833	HGNC:20774													
VAMP1	gene	VAMP1	Expert Review Amber;Royal Melbourne Hospital	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Spastic ataxia 1, autosomal dominant, 108600			Spasticity;HP:0001257	22958904		False	2	0;100;0	1.19	True		ENSG00000139190	ENSG00000139190	HGNC:12642													
FXN_FRDA_GAA	str	FXN	Expert Review Green;Expert list	Hereditary Spastic Paraplegia - adult onset		Neurology and neurodevelopmental disorders	BIALLELIC, autosomal or pseudoautosomal	Friedreich ataxia MIM#229300			Spasticity;HP:0001257	20301458;8596916		False	3	100;0;0	1.19	True		ENSG00000165060	ENSG00000165060	HGNC:3951	9	71652203	71652220	69037287	69037304	GAA	33	66					
