Hereditary Spastic Paraplegia Superpanel (Version 2.115)

List	Entity	Reviews	Mode of inheritance	Details
Filter Entities 210 Entitiess
Green Green List (high evidence)	ABCD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Sources Expert Review Green Expert list Phenotypes Adrenoleukodystrophy, MIM# 300100 Tags
Green Green List (high evidence)	ABCD1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes spastic paraparesis Hereditary spastic paraplegia Adrenoleukodystrophy, 300100 VLCFA accumulation adrenal failure Tags
Green Green List (high evidence)	ABHD16A Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 86, autosomal recessive, MIM# 619735 Intellectual Disability Corpus callosum abnormalities Tags
Green Green List (high evidence)	ADAR Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Aicardi-Goutieres syndrome 6, 615010 autosomal recessive Tags
Green Green List (high evidence)	AFG3L2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic ataxia 5, autosomal recessive, MIM# 614487 Spinocerebellar ataxia 28, MIM# 610246 Tags
Green Green List (high evidence)	AIMP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Leukodystrophy, hypomyelinating, 3, MIM#260600 Tags
Green Green List (high evidence)	ALDH18A1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 9B, autosomal recessive, MIM# 616586 Spastic paraplegia 9A, autosomal dominant, MIM# 601162 Tags
Green Green List (high evidence)	ALDH18A1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 9B, autosomal recessive, MIM# 616586 Spastic paraplegia 9A, autosomal dominant, MIM# 601162 Tags
Green Green List (high evidence)	ALDH3A2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Sjögren-Larsson syndrome Tags
Green Green List (high evidence)	ALS2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources ClinGen Expert Review Green Phenotypes ALS2-related motor neuron disease, MONDO:0100227 Tags
Green Green List (high evidence)	AMFR Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 89, autosomal recessive, MIM# 620379 Tags
Green Green List (high evidence)	AP4B1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 47, autosomal recessive, 614066 Tags
Green Green List (high evidence)	AP4E1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 51, autosomal recessive, 613744 Tags
Green Green List (high evidence)	AP4M1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 50, autosomal recessive, 612936 Tags
Green Green List (high evidence)	AP4S1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes developmental delay Spastic paraplegia 52, autosomal recessive, 614067 seizures Tags
Green Green List (high evidence)	AP5Z1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 48, autosomal recessive, MIM# 613647 MONDO:0013342 Tags
Green Green List (high evidence)	AP5Z1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 48, autosomal recessive, MIM# 613647 Tags
Green Green List (high evidence)	ARG1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Progressive spastic tetraplegia Argininaemia, 207800 Tags treatable
Green Green List (high evidence)	ARL6IP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 61, autosomal recessive, MIM#615685 Tags
Green Green List (high evidence)	ATAD3A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Harel-Yoon syndrome, MIM# 617183 Tags
Green Green List (high evidence)	ATL1 Hereditary Spastic Paraplegia - adult onset v1.15	3 reviews 3 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 3A, MIM 182600 Hereditary spastic paraplegia, AR Tags
Green Green List (high evidence)	ATL1 Hereditary Spastic Paraplegia - paediatric v1.102	3 reviews 3 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hereditary sensory neuropathy type ID, MIM 613708 Spastic paraplegia 3A, MIM 182600 Hereditary spastic paraplegia, AR Tags
Green Green List (high evidence)	ATP13A2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 78, autosomal recessive, 617225 Kufor-Rakeb syndrome, 606693 AR complicated hereditary spastic paraplegia Adult-onset lower-limb predominant spastic paraparesis Tags
Green Green List (high evidence)	B4GALNT1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 26, autosomal recessive MIM#609195 Tags
Green Green List (high evidence)	B4GALNT1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 26, autosomal recessive, 609195 Tags
Green Green List (high evidence)	BCAS3 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Hengel-Maroofian-Schols syndrome, MIM# 619641 Tags
Green Green List (high evidence)	BSCL2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Silver spastic paraplegia syndrome MIM#270685 Encephalopathy, progressive, with or without lipodystrophy MIM#615924 Tags
Green Green List (high evidence)	BSCL2 Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Silver spastic paraplegia syndrome, 270685 HSP 17, MONDO:0010043 Tags
Green Green List (high evidence)	C12orf65 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 55, autosomal recessive, 615035 optic atrophy and spasticity, tibial muscle weakness and atrophy, peripheral neuropathy Combined oxidative phosphorylation deficiency 7, 613559 Tags new gene name
Green Green List (high evidence)	C19orf12 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Neurodegeneration with brain iron accumulation 4, 614298 Spastic paraplegia 43, autosomal recessive, 615043 Tags
Green Green List (high evidence)	C19orf12 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Neurodegeneration with brain iron accumulation 4, MIM# 614298 Spastic paraplegia 43, autosomal recessive, MIM# 615043 Tags
Green Green List (high evidence)	CAPN1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Expert list Phenotypes Spastic paraplegia 76 autosomal recessive, 616907 MONDO:0014827 Tags
Green Green List (high evidence)	CCDC82 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder, MONDO:0700092, CCDC82-related Tags
Green Green List (high evidence)	CPT1C Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 73, autosomal dominant, MIM#616282 MONDO:0014568 Tags
Green Green List (high evidence)	CYP27A1 Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Cerebrotendinous xanthomatosis, 213700 MONDO:0008948 progressive lower extremity spasticity,often disproportionate to any degree of weakness Tags
Green Green List (high evidence)	CYP2U1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 56, autosomal recessive, 615030 Tags
Green Green List (high evidence)	CYP7B1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 5A, autosomal recessive, MIM# 270800 Tags
Green Green List (high evidence)	CYP7B1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 5A, autosomal recessive, 270800 MONDO:0010047 Tags
Green Green List (high evidence)	DARS Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Brain stem and spinal cord Hypomyelination leg spasticity Hypomyelination with brainstem and spinal cord involvement and leg spasticity, 615281 Tags
Green Green List (high evidence)	DARS Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hypomyelination with brainstem and spinal cord involvement and leg spasticity, MIM# 615281 Tags new gene name
Green Green List (high evidence)	DDHD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hereditary spastic paraplegia 28, MONDO:0012256 Tags
Green Green List (high evidence)	DDHD1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hereditary spastic paraplegia 28, MONDO:0012256 Tags
Green Green List (high evidence)	DDHD2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 54, autosomal recessive, MIM# 615033 MONDO:0014018 Tags
Green Green List (high evidence)	DDHD2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 54, autosomal recessive, MIM# 615033 MONDO:0014018 Tags
Green Green List (high evidence)	ELOVL1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies, MIM# 618527 Tags
Green Green List (high evidence)	ENTPD1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 64, autosomal recessive MIM#615683 Tags
Green Green List (high evidence)	ERLIN1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 62, 615681 Hereditary spastic paraplegia Tags
Green Green List (high evidence)	ERLIN2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 18, autosomal recessive, MIM# 611225 Spastic paraplegia 18A, autosomal dominant, MIM# 620512 Tags
Green Green List (high evidence)	ERLIN2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 18, autosomal recessive, MIM# 611225 Spastic paraplegia 18A, autosomal dominant, MIM# 620512 Tags
Green Green List (high evidence)	FA2H Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 35, autosomal recessive, MIM# 612319 Tags
Green Green List (high evidence)	FA2H Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 35, autosomal recessive, 611026 MONDO:0012866 Tags
Green Green List (high evidence)	FAR1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Cataracts, spastic paraparesis, and speech delay, MIM#619338 Peroxisomal fatty acyl-CoA reductase 1 disorder, MIM# 616154 Tags
Green Green List (high evidence)	FARS2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 77, autosomal recessive, 617046 Tags
Green Green List (high evidence)	FBXO7 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Parkinson disease 15, autosomal recessive MIM#260300 Tags
Green Green List (high evidence)	FICD Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 92, autosomal recessive, MIM# 620911 Tags
Green Green List (high evidence)	FXN Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Friedreich ataxia, 229300 Tags STR SV/CNV
Green Green List (high evidence)	FXN_FRDA_GAA STR Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Friedreich ataxia MIM#229300 Tags
Green Green List (high evidence)	GALC Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Krabbe disease MIM#245200 Tags
Green Green List (high evidence)	GAN Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Giant axonal neuropathy-1, MIM# 256850 Tags
Green Green List (high evidence)	GBA2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 46, autosomal recessive, 614409 MONDO:0013737 Tags
Green Green List (high evidence)	GBA2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 46, autosomal recessive, MIM# 614409 Tags
Green Green List (high evidence)	GBE1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Polyglucosan body disease, adult form MIM#263570 Tags
Green Green List (high evidence)	GCH1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Dystonia, DOPA-responsive, with or without hyperphenylalaninemia, MIM# 128230 Tags
Green Green List (high evidence)	GCH1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Hereditary spastic paraplegia MONDO:0019064, GCH1-related Tags
Green Green List (high evidence)	GFAP Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Alexander disease MONDO:0008752 Tags
Green Green List (high evidence)	GFAP Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Alexander disease MONDO:0008752 Tags
Green Green List (high evidence)	GJA1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hereditary spastic paraplegia Oculodentodigital dysplasia, 164200, Oculodentodigital dysplasia, autosomal recessive, 257850 Tags
Green Green List (high evidence)	GLRX5 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spasticity, childhood-onset, with hyperglycinemia 616859 Tags
Green Green List (high evidence)	GPT2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Neurodevelopmental disorder with microcephaly and spastic paraplegia, MIM# 616281 Tags
Green Green List (high evidence)	HACE1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia and psychomotor retardation with or without seizures, 616756 MONDO:0014764 Spastic paraplegia psychomotor retardation Tags
Green Green List (high evidence)	HPDL Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities (NEDSWMA), MIM#619026 Progressive neurological disorder Leigh-like syndrome Tags
Green Green List (high evidence)	HSPD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Leukodystrophy, hypomyelinating, 4, MIM# 612233 Spastic paraplegia 13, autosomal dominant, MIM# 605280 Tags
Green Green List (high evidence)	IBA57 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 74, autosomal recessive MIM#616451 Tags
Green Green List (high evidence)	IFIH1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Aicardi-Goutieres syndrome 7 MIM#615846 Tags
Green Green List (high evidence)	INPP4A Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder with growth impairment, quadriparesis, and poor or absent speech, MIM# 621354 Tags
Green Green List (high evidence)	KCNA2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Hereditary spastic paraplegia and ataxia Tags
Green Green List (high evidence)	KDM5C Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type MIM# 300534 MONDO:0010355 Tags
Green Green List (high evidence)	KIDINS220 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia, intellectual disability, nystagmus, and obesity, MIM# 617296 MONDO:0015007 Tags
Green Green List (high evidence)	KIF1A Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 30, autosomal dominant MIM# 610357 Spastic paraplegia 30, autosomal recessive 620607 Tags
Green Green List (high evidence)	KIF1A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 30, autosomal dominant MIM# 610357 Spastic paraplegia 30, autosomal recessive 620607 Tags
Green Green List (high evidence)	KIF1C Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic ataxia 2, autosomal recessive, 611302 Spastic ataxia 2, autosomal recessive Tags
Green Green List (high evidence)	KIF5A Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 10, autosomal dominant, MIM# 604187 Tags
Green Green List (high evidence)	KIF5A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 10, autosomal dominant, MIM# 604187 Tags
Green Green List (high evidence)	KLC2 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia, optic atrophy, and neuropathy, MIM#609541 Tags SV/CNV
Green Green List (high evidence)	KPNA3 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Spastic paraplegia-88 (SPG88), MIM#620106 Tags
Green Green List (high evidence)	L1CAM Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Sources Expert Review Green Expert list Phenotypes Hereditary spastic paraplegia, 308840 MASA syndrome, 303350 X-linked hydrocephalus, 307000 Tags
Green Green List (high evidence)	MAG Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 75, autosomal recessive, 616680 Cerebellar ataxia Tags
Green Green List (high evidence)	MAPK8IP3 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Green Expert list Phenotypes Neurodevelopmental disorder with or without variable brain abnormalities 618443 Tags
Green Green List (high evidence)	MARS2 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Expert Review Green Victorian Clinical Genetics Services Australian Genomics Health Alliance Mitochondrial Flagship Victorian Clinical Genetics Services Phenotypes Spastic ataxia 3, autosomal recessive MIM#611390 Tags SV/CNV
Green Green List (high evidence)	MED27 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder with spasticity, cataracts, and cerebellar hypoplasia, MIM# 619286 Tags
Green Green List (high evidence)	NFU1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Multiple mitochondrial dysfunctions syndrome 1 (MIM#605711) Spastic paraplegia 93, autosomal recessive, MIM# 620938 Tags
Green Green List (high evidence)	NIPA1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 6, autosomal dominant, MIM# 600363 MONDO:0010878 Tags
Green Green List (high evidence)	NIPA1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 6, autosomal dominant, MIM# 600363 Tags
Green Green List (high evidence)	NKX6-2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy, 617560 MONDO:0033043 Tags
Green Green List (high evidence)	NOTCH1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Genetic cerebral small vessel disease (MONDO:0018787), NOTCH1-related Tags
Green Green List (high evidence)	NOTCH1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Genetic cerebral small vessel disease (MONDO:0018787), NOTCH1-related Tags
Green Green List (high evidence)	NT5C2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 45, autosomal recessive, MIM# 613162 MONDO:0013165 Tags
Green Green List (high evidence)	OPA3 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes 3-methylglutaconic aciduria, type III, MIM# 258501 Tags
Green Green List (high evidence)	OPA3 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes 3-methylglutaconic aciduria, type III, MIM# 258501 Tags
Green Green List (high evidence)	PCYT2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes global developmental delay regression spastic parapesis or tetraparesis epilepsy progressive cerebral and cerebellar atrophy Tags
Green Green List (high evidence)	PCYT2 Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Expert list Phenotypes Spastic paraplegia 82, autosomal recessive, MIM# 618770 global developmental delay regression spastic parapesis or tetraparesis epilepsy progressive cerebral and cerebellar atrophy Tags
Green Green List (high evidence)	PI4KA Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental syndrome with hypomyelinating leukodystrophy Spastic paraplegia 84, autosomal recessive, MIM# 619621 Tags
Green Green List (high evidence)	PLP1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 2, X-linked recessive, 312920 Tags
Green Green List (high evidence)	PLP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 2, X-linked, MIM# 312920 Tags
Green Green List (high evidence)	PNPLA6 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 39, autosomal recessive, 612020 Tags
Green Green List (high evidence)	PNPLA8 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Complex neurodevelopmental disorder, MONDO:0100038, PNPLA8-related Tags
Green Green List (high evidence)	POLR3A Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic ataxia Tags deep intronic
Green Green List (high evidence)	PSEN1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Alzheimer disease, type 3, with spastic paraparesis and apraxia, MIM# 607822 Tags
Green Green List (high evidence)	RAB3A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes neurodevelopmental disorder MONDO:0700092 Tags
Green Green List (high evidence)	RAB3GAP2 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Martsolf syndrome 212720 Tags
Green Green List (high evidence)	REEP1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 31, autosomal dominant, 610250 MONDO:0012453 Tags
Green Green List (high evidence)	REEP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 31, autosomal dominant, MIM# 610250 Tags
Green Green List (high evidence)	REEP2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 72, dominant and recessive, MIM# 615625 MONDO:0014282 Tags
Green Green List (high evidence)	RINT1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Hereditary spastic paraplegia, MONDO:0019064, RINT1-related Tags
Green Green List (high evidence)	RNASEH2B Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Aicardi Goutieres syndrome 2, MIM# 610181 Tags
Green Green List (high evidence)	RNF170 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 85, autosomal recessive, MIM# 619686 Tags
Green Green List (high evidence)	RNU7-1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Aicardi-Goutieres syndrome 9, MIM# 619487 Tags non-coding gene
Green Green List (high evidence)	RTN2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 12, autosomal dominant, 604805 MONDO:0011489 Tags
Green Green List (high evidence)	RTN2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 12, autosomal dominant, 604805 MONDO:0011489 Tags
Green Green List (high evidence)	SACS Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic ataxia, Charlevoix-Saguenay type, 270550 MONDO:0010041 Tags SV/CNV
Green Green List (high evidence)	SACS Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic ataxia, Charlevoix-Saguenay type, MIM@ 270550 Tags
Green Green List (high evidence)	SAMHD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Aicardi Goutieres syndrome 5, MIM# 612952 Tags
Green Green List (high evidence)	SERAC1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome, MIM# 614739 Tags
Green Green List (high evidence)	SHMT2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB), MIM#619121 Congenital microcephaly Infantile axial hypotonia Spastic paraparesis Global developmental delay Intellectual disability Abnormality of the corpus callosum Abnormal cortical gyration Hypertrophic cardiomyopathy Abnormality of the face Proximal placement of thumb 2-3 toe syndactyly Tags
Green Green List (high evidence)	SLC16A2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	X-LINKED: hemizygous mutation in males, biallelic mutations in females	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Allan-Herndon-Dudley syndrome, 300523, XL Tags
Green Green List (high evidence)	SLC1A4 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic tetraplegia, thin corpus callosum, and progressive microcephaly, 616657 MONDO:0014725 Tags founder
Green Green List (high evidence)	SLC25A15 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Hyperornithinemia-hyperammonemia-homocitrullinemia syndrome MIM#238970 Tags
Green Green List (high evidence)	SLC2A1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes GLUT1 deficiency syndrome 1, infantile onset, severe, MIM# 606777 Developmental delay autosomal dominant, complicated hereditary spastic paraplegia (HSP) paroxysmal choreoathetosis spastic paraplegia seizure Tags
Green Green List (high evidence)	SNAPC4 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Neurodevelopmental disorder with motor regression, progressive spastic paraplegia, and oromotor dysfunction, MIM# 620515 Tags
Green Green List (high evidence)	SOD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic tetraplegia and axial hypotonia, progressive, MIM#618598 Tags
Green Green List (high evidence)	SPART Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Troyer syndrome, MIM# 275900 SPG20 MONDO:0010156 Tags
Green Green List (high evidence)	SPAST Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 4, autosomal dominant, 182601 Tags
Green Green List (high evidence)	SPAST Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 4, autosomal dominant, MIM# 182601 Cerebral Palsy MONDO:0006497, SPAST-related, AR Tags
Green Green List (high evidence)	SPG11 Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 11, autosomal recessive, MIM# 604360 Tags
Green Green List (high evidence)	SPG11 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 11, autosomal recessive, MIM# 604360 Tags
Green Green List (high evidence)	SPG21 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Mast syndrome, 248900 Spastic Paraplegia, autosomal recessive Tags new gene name
Green Green List (high evidence)	SPG7 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 7, autosomal recessive, 607259 MONDO:0011803 Tags
Green Green List (high evidence)	SPG7 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 7, autosomal recessive, MIM# 607259 Tags
Green Green List (high evidence)	SPTAN1 Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic Paraplegia MONDO:0019064, SPTAN1-related Autosomal dominant spastic paraplegia-91, with or without cerebellar ataxia (SPG91), MIM#620538 Tags
Green Green List (high evidence)	TAF1C Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes complex neurodevelopmental disorder, TAF1C-related, MONDO:0100038 Tags
Green Green List (high evidence)	TBCE Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Encephalopathy, progressive, with amyotrophy and optic atrophy 617207 Tags
Green Green List (high evidence)	TECPR2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 49, autosomal recessive, 615031 Autonomic-sensory neuropathy Tags
Green Green List (high evidence)	TFG Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 57, autosomal recessive, MIM# 615658 Tags
Green Green List (high evidence)	TMEM63C Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 2 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Spastic paraplegia 87, autosomal recessive, MIM# 619966 Tags
Green Green List (high evidence)	TSPOAP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Literature Phenotypes Dystonia, intellectual disability and cerebellar atrophy Tags
Green Green List (high evidence)	TUBA4A Hereditary Spastic Paraplegia - adult onset v1.15	2 reviews 2 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Spastic ataxia 11, autosomal dominant, MIM# 621226 Tags
Green Green List (high evidence)	TUBA4A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Hereditary ataxia MONDO:0100309, TUBA4A-related Tags
Green Green List (high evidence)	TUBB4A Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Expert list Phenotypes Leukodystrophy, hypomyelinating, 6, MIM# 612438 Tags
Green Green List (high evidence)	UBAP1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Royal Melbourne Hospital Phenotypes Spastic paraplegia 80, autosomal dominant 618418 Tags
Green Green List (high evidence)	UBAP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Literature Phenotypes Childhood-onset hereditary spastic paraplegia Spastic paraplegia 80, autosomal dominant 618418 Tags
Green Green List (high evidence)	UCHL1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 79A, autosomal dominant, MIM# 620221 Spastic paraplegia 79, autosomal recessive, 615491 MONDO:0014209 Neurodegenerative disease, MONDO:0005559, UCHL1-related Tags
Green Green List (high evidence)	WASHC5 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Spastic paraplegia 8, autosomal dominant, 603563 MONDO:0011339 Tags
Green Green List (high evidence)	WDR45B Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Royal Melbourne Hospital Phenotypes Profound developmental delay, early-onset refractory epilepsy, progressive spastic quadriplegia and contractures, and brain malformations Neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures, MIM#617977 Tags
Green Green List (high evidence)	ZFYVE26 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Phenotypes Spastic paraplegia 15, autosomal recessive, MIM# 270700 Tags
Green Green List (high evidence)	ZFYVE26 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 green	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Green Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 15, autosomal recessive, 270700 MONDO:0010044 Tags
Amber Amber List (moderate evidence)	AAAS Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Expert list Phenotypes Achalasia-addisonianism-alacrimia syndrome MIM#231550 complicated hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	ALK Hereditary Spastic Paraplegia - paediatric v1.102	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Literature Phenotypes Spastic-dystonic diplegia Tags
Amber Amber List (moderate evidence)	ATP2B4 Hereditary Spastic Paraplegia - adult onset v1.15	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Pure and complicated hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	BICD2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Amber Expert list Phenotypes Spinal muscular atrophy, lower extremity-predominant, 2A, autosomal dominant, MIM#615290 Spinal muscular atrophy, lower extremity-predominant, 2B, autosomal dominant, MIM#618291 Tags
Amber Amber List (moderate evidence)	CCDC88C Hereditary Spastic Paraplegia - paediatric v1.102	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Literature Phenotypes Early-onset pure hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	CHMP3 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Literature Phenotypes Hereditary spastic paraplegia (MONDO:0019064), CHMP3-related Tags
Amber Amber List (moderate evidence)	DSTYK Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic paraplegia 23, MIM#270750 Tags founder SV/CNV
Amber Amber List (moderate evidence)	EXOSC3 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Pontocerebellar hypoplasia, type 1b Complicated hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	GJC2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Expert list Phenotypes Spastic paraplegia 44, autosomal recessive, MIM# 613206 Tags
Amber Amber List (moderate evidence)	GJC2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Leukodystrophy, hypomyelinating, 2, 608804, AR Spastic paraplegia 44, autosomal recessive 613206, AR Tags
Amber Amber List (moderate evidence)	HSPD1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic paraplegia 13, autosomal dominant, MIM# 605280 Tags
Amber Amber List (moderate evidence)	IRF2BPL Hereditary Spastic Paraplegia - paediatric v1.102	1 review	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Amber Expert list Phenotypes Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures 618088 Tags
Amber Amber List (moderate evidence)	LYST Hereditary Spastic Paraplegia - adult onset v1.15	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes spastic paraplegia Spastic paraplegia Chediak-Higashi syndrome, 214500 Tags
Amber Amber List (moderate evidence)	MARS Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic paraplegia 70, autosomal recessive, MIM# 620323 Tags
Amber Amber List (moderate evidence)	PNPLA6 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Expert list Phenotypes Spastic paraplegia 39, autosomal recessive, MIM# 612020 Tags
Amber Amber List (moderate evidence)	SEC31A Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Literature Phenotypes Neurodevelopmental disorder with spastic quadriplegia, optic atrophy, seizures, and structural brain anomalies, MIM# 618651 congenital neurodevelopmental syndrome spastic paraplegia multiple contractures profound developmental delay epilepsy failure to thrive Tags
Amber Amber List (moderate evidence)	SELENOI Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic paraplegia 81, autosomal recessive 618768 developmental delay spasticity periventricular white mater abnormalities peripheral neuropathy seizures bifid uvula in some affected individuals Tags
Amber Amber List (moderate evidence)	SOX10 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Neurocristopathy PCWH syndrome, MIM#609136 Complicated hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	SPTSSA Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews 1 green	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Sources Expert Review Amber Literature Phenotypes Spastic paraplegia 90B, autosomal recessive , MIM# 620417 Spastic paraplegia 90A, autosomal dominant, MIM# 620416 Tags
Amber Amber List (moderate evidence)	SVBP Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Literature Phenotypes Spastic paraplegia 94, autosomal recessive, MIM# 621150 Tags founder
Amber Amber List (moderate evidence)	TBCB Hereditary Spastic Paraplegia - paediatric v1.102	2 reviews	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Literature Phenotypes Neurodevelopmental disorder with behavioural abnormalities and childhood onset spastic paraplegia, MIM# 621382 Tags
Amber Amber List (moderate evidence)	TUBB4A Hereditary Spastic Paraplegia - adult onset v1.15	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Expert list Royal Melbourne Hospital Phenotypes ataxia Leukodystrophy, hypomyelinating, 612438 AD Dystonia 4, torsion, autosomal dominant, 128101 Tags
Amber Amber List (moderate evidence)	UNC80 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 Tags
Amber Amber List (moderate evidence)	USP8 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Complicated hereditary spastic paraplegia Tags
Amber Amber List (moderate evidence)	VAMP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Expert list Phenotypes Spastic ataxia 1, autosomal dominant, MIM# 108600 Tags founder
Amber Amber List (moderate evidence)	VAMP1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic ataxia 1, autosomal dominant, 108600 Tags founder
Amber Amber List (moderate evidence)	VPS37A Hereditary Spastic Paraplegia - paediatric v1.102	1 review	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Amber Royal Melbourne Hospital Phenotypes Spastic paraplegia 53, autosomal recessive, MIM# 614898, AR Tags
Red Red List (low evidence)	ACOX1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Pseudoneonatal adrenoleukodystrophy Tags
Red Red List (low evidence)	AMPD2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Spastic paraplegia 63 MIM#615686 Tags
Red Red List (low evidence)	ARSI Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Childhood onset spastic paraplegia Tags
Red Red List (low evidence)	ATP1A1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Red Literature Literature Phenotypes Hereditary spastic paraplegia Tags
Red Red List (low evidence)	CCT5 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Neuropathy, hereditary sensory, with spastic paraplegia Sensory Neuropathy with Spastic Paraplegia Tags
Red Red List (low evidence)	CLPP Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Perrault syndrome 3 MIM#614129 Tags
Red Red List (low evidence)	COQ7 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Literature Phenotypes Hereditary spastic paraplegia, COQ7-related (MONDO#0019064) Tags
Red Red List (low evidence)	DNM2 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Complicated hereditary spastic paraplegia Tags
Red Red List (low evidence)	FOXG1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Rett syndrome Tags
Red Red List (low evidence)	GAD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Victorian Clinical Genetics Services Victorian Clinical Genetics Services Phenotypes Cerebralpalsy, spasticquadriplegic,1, 603513 Tags
Red Red List (low evidence)	GRID2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Expert list Phenotypes Complicated spastic paraplegia Tags
Red Red List (low evidence)	HARS2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Perrault syndrome 2, MIM#614926 Tags
Red Red List (low evidence)	IFRD1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Royal Melbourne Hospital Phenotypes autosomal dominant hereditary spastic paraplegia associated with peripheral neuropathy and ataxia Tags refuted
Red Red List (low evidence)	KLC4 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes spastic paraplegia progressive complicated spastic paraplegia Tags
Red Red List (low evidence)	LARS2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Perrault syndrome 4 MIM#615300 Tags
Red Red List (low evidence)	MTPAP Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes ?Spastic ataxia 4, autosomal recessive, 613672 Ataxia, spastic, 4 Spastic ataxia 4, autosomal recessive Tags
Red Red List (low evidence)	PGAP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Mental retardation, autosomal recessive 42 Tags
Red Red List (low evidence)	SARS2 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Literature Phenotypes Progressive spastic paraplegia Tags
Red Red List (low evidence)	SLC19A3 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Biotin-thiamine-responsive basal ganglia disease, MIM#607483 Tags
Red Red List (low evidence)	SLC33A1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Red Expert list Phenotypes Spastic paraplegia 42, autosomal dominant, MIM# 612539 Tags
Red Red List (low evidence)	SLC33A1 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Red Expert list Royal Melbourne Hospital Phenotypes Spastic paraplegia 42, autosomal dominant Congenital cataracts, hearing loss, and neurodegeneration 614482, AR:Spastic paraplegia 42, autosomal dominant, 612539 AD Tags
Red Red List (low evidence)	STXBP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Spasticity Early infantile epileptic encephalopathy 4 Tags
Red Red List (low evidence)	TPP1 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Ceroid lipofuscinosis neuronal 2, MIM#204500 Tags
Red Red List (low evidence)	TSPOAP1 Hereditary Spastic Paraplegia - adult onset v1.15	3 reviews 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Literature Phenotypes Dystonia 22, MIM# 620453 Tags
Red Red List (low evidence)	TTR Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Amyloidosis, hereditary, transthyretin-related, MIM# 105210 Tags
Red Red List (low evidence)	WDR48 Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Spastic paraplegia Tags
Red Red List (low evidence)	ZFR Hereditary Spastic Paraplegia - paediatric v1.102	1 review 1 red	BIALLELIC, autosomal or pseudoautosomal	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Complicated hereditary spastic paraplegia Tags
Red Red List (low evidence)	ZFYVE27 Hereditary Spastic Paraplegia - adult onset v1.15	1 review 1 red	MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted	Sources Expert Review Red Royal Melbourne Hospital Phenotypes Spastic paraplegia 33, autosomal dominant, MIM#610244 Tags

Hereditary Spastic Paraplegia Superpanel (Version 2.115)

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