Stroke

Gene: ABCA1

Green List (high evidence)

ABCA1 (ATP binding cassette subfamily A member 1)
EnsemblGeneIds (GRCh38): ENSG00000165029
EnsemblGeneIds (GRCh37): ENSG00000165029
OMIM: 600046, Gene2Phenotype
ABCA1 is in 5 panels

3 reviews

Katrina Bell (Murdoch Children's Research Institute)

Green List (high evidence)

VBDSZB DFAZZD
Created: 17 Feb 2025, 10:48 p.m. | Last Modified: 17 Feb 2025, 10:48 p.m.
Panel Version: 1.2301

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
Campomelic dysplasia with autosomal sex reversal 114290

Publications

  • X VX

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

Green List (high evidence)

Tangier disease is an autosomal recessive disorder characterized by markedly reduced levels of plasma high density lipoproteins (HDL) resulting in tissue accumulation of cholesterol esters. Clinical features include very large, yellow-orange tonsils, enlarged liver, spleen and lymph nodes, hypocholesterolemia, and abnormal chylomicron remnants. Mono-allelic variants cause HDL deficiency.
Created: 29 Aug 2020, 7:57 a.m. | Last Modified: 29 Aug 2020, 7:57 a.m.
Panel Version: 0.4006

Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal

Phenotypes
Tangier disease, MIM# 205400; HDL deficiency, familial, 1, MIM# 604091

Publications

Bryony Thompson (Royal Melbourne Hospital)

Green List (high evidence)

Cases have been reported with large artery atherosclerosis, cardio embolism due to cardiomyopathy, intracerebral bleeding, and bleeding tendency stroke subtypes. Also a hamster model with ischemic stroke.
Sources: Literature
Created: 30 Apr 2020, 8:51 a.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Tangier disease MIM#205400

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Phenotypes
  • Tangier disease MIM#205400
OMIM
600046
Clinvar variants
Variants in ABCA1
Penetrance
None
Publications
Panels with this gene

History Filter Activity

10 Mar 2021, Gel status: 3

Entity classified by Genomics England curator

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

Gene: abca1 has been classified as Green List (High Evidence).

30 Apr 2020, Gel status: 3

Entity classified by Genomics England curator

Bryony Thompson (Royal Melbourne Hospital)

Gene: abca1 has been classified as Green List (High Evidence).

30 Apr 2020, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Bryony Thompson (Royal Melbourne Hospital)

gene: ABCA1 was added gene: ABCA1 was added to Stroke. Sources: Literature Mode of inheritance for gene: ABCA1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: ABCA1 were set to 30356112; 22913675; 30278532; 31487778 Phenotypes for gene: ABCA1 were set to Tangier disease MIM#205400 Review for gene: ABCA1 was set to GREEN