Description
This is a superpanel containing genes associated with non-syndromic and syndromic limb and digital malformations.

325 Entities

291 reviewed, 289 green

List Entity Reviews Mode of inheritance Details
325 Entitiess
Green Green List (high evidence)
10q24 duplication syndrome Split hand foot malformation 3
10q24 duplication syndrome Split hand foot malformation 3
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Split-hand/foot malformation 3, gene duplication syndrome, MIM#246560
Tags
Green Green List (high evidence)
ACVR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Fibrodysplasia ossificans progressiva 135100
Tags
  • clinical trial
Green Green List (high evidence)
ADAMTS10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
  • Expert Review Green
Disease associations
  • Weill-Marchesani syndrome 1, recessive, 277600
Tags
Green Green List (high evidence)
ADAMTS17
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Weill-Marchesani syndrome type 4
Tags
Green Green List (high evidence)
AFF4
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Other
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • CHOPS syndrome MIM#616368
Tags
Green Green List (high evidence)
AKT3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 2, MIM# 615937
Tags
Green Green List (high evidence)
ANKRD11
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • KBG syndrome 148050
Tags
Green Green List (high evidence)
ARHGAP31
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Genetic Health Queensland
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Adams-Oliver syndrome 1 100300
Tags
Green Green List (high evidence)
ARID1A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
Disease associations
  • Coffin-Siris
Tags
Green Green List (high evidence)
ARID1B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
Disease associations
  • Coffin-Siris syndrome type 1 - 135900
Tags
Green Green List (high evidence)
ARL6
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 3, MIM# 600151
Tags
Green Green List (high evidence)
B3GLCT
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • O-fucose-specific beta-1,3-N-glucosyltransferase deficiency (Disorders of protein O-glycosylation, O-mannosylglycan synthesis deficiencies)
  • Peters-plus syndrome 261540
Tags
Green Green List (high evidence)
B9D1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genetic Health Queensland
  • Victorian Clinical Genetics Services
Disease associations
  • Ciliopathy, MONDO:0005308, B9D1-related
Tags
Green Green List (high evidence)
B9D2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genetic Health Queensland
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 34, MIM#614175
  • Meckel syndrome 10, MIM#614175
Tags
Green Green List (high evidence)
BBS1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 1, MIM# 209900
Tags
Green Green List (high evidence)
BBS10
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
BBS12
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
BBS2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
BBS4
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 4, MIM#615982
  • MONDO:0014433
Tags
Green Green List (high evidence)
BBS5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 5, MIM#615983
  • MONDO:0014434
Tags
Green Green List (high evidence)
BBS7
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 7, MIM# 615984
  • MONDO:0014435
Tags
Green Green List (high evidence)
BBS9
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 9, MIM#615986
  • MONDO:0014437
Tags
Green Green List (high evidence)
BHLHA9
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Syndactyly, mesoaxial synostotic, with phalangeal reduction, MIM# 609432
Tags
Green Green List (high evidence)
BMP2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Brachydactyly, type A2 112600
  • short stature, facial dysmorphism and skeletal anomalies with or without cardiac aomalies 617877.
Tags
Green Green List (high evidence)
BMP2 downstream regulatory region
BMP2 downstream regulatory region
Region
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Literature
  • Expert Review Green
  • Expert Review Green
  • Literature
Disease associations
  • Brachydactyly, type A2 MIM#112600
Tags
  • regulatory region
Green Green List (high evidence)
BMP4
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
BMPR1B
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Acromesomelic dysplasia, Demirhan type 609441
  • Brachydactyly, type A1, D 616849
  • Brachydactyly, type A2 112600
Tags
Green Green List (high evidence)
BRCA2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group D1, MIM# 605724
Tags
Green Green List (high evidence)
BRIP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group J, MIM# 609054
Tags
  • treatable
Green Green List (high evidence)
C2CD3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CACNA1C
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Timothy syndrome MIM#601005
Tags
Green Green List (high evidence)
CC2D2A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CCND2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CCNQ
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • syndactyly-telecanthus-anogenital and renal malformations syndrome MONDO:0010408
Tags
Green Green List (high evidence)
CDH3
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Ectodermal dysplasia, ectrodactyly, and macular dystrophy 225280
Tags
Green Green List (high evidence)
CDK20
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Lemire-Marshall-Drivas-Chitayat syndrome, MIM# 621676
Tags
Green Green List (high evidence)
CENPF
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CEP120
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 13 with or without polydactyly, MIM# 616300
Tags
Green Green List (high evidence)
CEP164
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome
  • Nephronophthisis 15, MIM# 614845
  • Oro-facio-digital syndrome
Tags
Green Green List (high evidence)
CEP290
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
CEP41
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CHSY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Temtamy preaxial brachydactyly syndrome 605282
Tags
Green Green List (high evidence)
CIBAR1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Polydactyly, postaxial, type A9, MIM# 618219
Tags
Green Green List (high evidence)
CILK1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Endocrine-cerebroosteodysplasia, MIM# 612651
Tags
Green Green List (high evidence)
CKAP2L
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CPLANE1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 17, MIM# 614615
  • MONDO:0013824
  • Orofaciodigital syndrome VI, MIM# 277170
Tags
  • new gene name
Green Green List (high evidence)
CPLANE2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Ciliopathy, MONDO:0005308, CPLANE2-related
Tags
Green Green List (high evidence)
CREBBP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Rubinstein-Taybi syndrome 180849
Tags
Green Green List (high evidence)
CSPP1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 21, MIM# 615636
  • MONDO:0014288
Tags
Green Green List (high evidence)
DDX59
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Orofaciodigital syndrome V (MIM#174300)
Tags
Green Green List (high evidence)
DHCR7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Smith-Lemli-Opitz syndrome - MIM#270400
Tags
Green Green List (high evidence)
DHCR7
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • NHS GMS
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Smith-Lemli-Opitz syndrome 270400
Tags
Green Green List (high evidence)
DHODH
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Miller syndrome (postaxial acrofacial dysostosis) 263750
Tags
Green Green List (high evidence)
DLL4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Adams-Oliver syndrome 6, 616589
Tags
Green Green List (high evidence)
DLX5
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert list
  • NHS GMS
Disease associations
  • Split-hand/foot malformation 1 with sensorineural hearing loss 220600
Tags
Green Green List (high evidence)
DLX5 downstream regulatory region
DLX5 downstream regulatory region
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Split-hand/foot malformation 1 MIM#183600
Tags
  • regulatory region
Green Green List (high evidence)
DOCK6
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Adams-Oliver syndrome 2 614219
Tags
Green Green List (high evidence)
DPF2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Coffin-Siris syndrome 7 MIM#618027
Tags
Green Green List (high evidence)
DVL1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • NHS GMS
  • Expert list
Disease associations
  • Robinow syndrome, autosomal dominant 2, MIM# 616331
Tags
Green Green List (high evidence)
DVL3
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Robinow syndrome, autosomal dominant 3, 616894
Tags
Green Green List (high evidence)
DYNC1I1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Split-hand/split-foot malformation (SHFM) MONDO:0016576, DYNC1I1-related
Tags
  • SV/CNV
Green Green List (high evidence)
DYNC2H1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 3 with or without polydactyly, MIM# 613091
  • MONDO:0013127
Tags
Green Green List (high evidence)
DYNC2I1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 8 with or without polydactyly, MIM# 615503
  • Retinitis pigmentosa
Tags
Green Green List (high evidence)
DYNC2I2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
DYNC2LI1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 15 with polydactyly (MIM#617088)
Tags
Green Green List (high evidence)
DYNLT2B
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 17 with or without polydactyly, MIM# 617405
Tags
Green Green List (high evidence)
EBP
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
EOGT
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Adams Oliver syndrome 4
Tags
Green Green List (high evidence)
EP300
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Rubinstein-Taybi syndrome 180849
Tags
Green Green List (high evidence)
ERCC4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi aanemia, complementation group Q, MIM# 615272
  • MONDO:0014108
Tags
Green Green List (high evidence)
ESCO2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • SC phocomelia syndrome 269000
  • Roberts syndrome 268300
Tags
Green Green List (high evidence)
ESCO2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Roberts syndrome 268300
  • SC phocomelia syndrome 269000
  • Juberg-Hayward syndrome, MIM# 216100
Tags
Green Green List (high evidence)
EVC
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Ellis-van Creveld syndrome, MIM# 225500
Tags
Green Green List (high evidence)
EVC2
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Ellis-van Creveld syndrome, MIM# 225500 Weyers acrofacial dysostosis, MIM# 193530
Tags
Green Green List (high evidence)
FAAP100
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Fanconi anaemia, complementation group X, MIM# 621258
Tags
Green Green List (high evidence)
FANCA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group A, MIM# 227650
  • MONDO:0009215
Tags
Green Green List (high evidence)
FANCB
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group B, MIM# 300514
  • MONDO:0010351
Tags
Green Green List (high evidence)
FANCC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group C, MIM# 227645
  • MONDO:0009213
Tags
Green Green List (high evidence)
FANCD2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group D2, MIM# 227646
  • MONDO:0009214
Tags
Green Green List (high evidence)
FANCE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group E, MIM# 600901
  • MONDO:0010953
Tags
Green Green List (high evidence)
FANCF
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group F 603467
  • MONDO:0011325
Tags
Green Green List (high evidence)
FANCG
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group G, MIM# 614082
  • MONDO:0013565
Tags
Green Green List (high evidence)
FANCI
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anemia, complementation group I, MIM# 609053
  • MONDO:0012186
Tags
Green Green List (high evidence)
FANCL
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anemia, complementation group L, MIM# 614083
  • MONDO:0013566
Tags
Green Green List (high evidence)
FAT1
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Focal segmental glomerulosclerosis (MONDO:0100313), FAT1-related
Tags
Green Green List (high evidence)
FBN1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Marfan syndrome 154700
  • Weill-Marchesani syndrome 2, dominant 608328
  • Stiff skin syndrome 184900
  • Acromicric dysplasia 102370
  • Geleophysic dysplasia 2 614185
Tags
Green Green List (high evidence)
FGF10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Lacrimoauriculodentodigital syndrome (149730)
  • Aplasia of lacrimal and salivary glands (180920)
Tags
Green Green List (high evidence)
FGF10
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FGF9
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Multiple synostoses syndrome type 3 612961
Tags
Green Green List (high evidence)
FGFR1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FGFR2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FGFR2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • LADD syndrome, MIM#149730
Tags
Green Green List (high evidence)
FGFR3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • LADD syndrome, MIM#149730
Tags
Green Green List (high evidence)
FGFR3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FIG4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Yunis-Varon syndrome, MIM# 216340
Tags
Green Green List (high evidence)
FIG4
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Yunis-Varon syndrome 216340
  • Amyotrophic lateral sclerosis 11 612577
Tags
Green Green List (high evidence)
FLNA
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Osteodysplasty Melnick Needles 309350 XLD
  • Otopalatodigital syndrome, type II 304120 XLD
  • Frontometaphyseal dysplasia 305620
  • Terminal osseous dysplasia 300244
  • Otopalatodigital syndrome, type I -311300
Tags
Green Green List (high evidence)
FLNA
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Melnick-Needles syndrome, 309350
Tags
Green Green List (high evidence)
FLVCR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • neurodevelopmental disorder MONDO:0700092, FLVCR1-related
Tags
Green Green List (high evidence)
FRAS1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FREM2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FZD2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Autosomal dominant omodysplasia 164745
  • Autosomal dominant omodysplasia type 2 164745
Tags
Green Green List (high evidence)
GDF5
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
GDF5
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Brachydactyly, type A1, C, MIM# 615072
  • Brachydactyly, type A2 MIM#112600
  • Brachydactyly, type C, MIM# 113100
  • Symphalangism, proximal, 1B, MIM# 615298
Tags
Green Green List (high evidence)
GDF6
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Multiple synostoses syndrome type 4 - 617898.
  • Klippel-Feil syndrome 1, autosomal dominant 118100
Tags
Green Green List (high evidence)
GJA1
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hypoplastic left heart syndrome 1 241550
  • Syndactyly, type III 186100
  • Oculodentodigital dysplasia 164200
  • Palmoplantar keratoderma with congenital alopecia 104100
  • Craniometaphyseal dysplasia, autosomal recessive 218400
  • Erythrokeratodermia variabilis et progressiva 133200
  • Oculodentodigital dysplasia, autosomal recessive 257850
Tags
Green Green List (high evidence)
GLI1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Polydactyly, postaxial, type A8 MIM#618123
  • Polydactyly, preaxial I MIM#174400
Tags
Green Green List (high evidence)
GLI2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
GLI3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Greig cephalopolysyndactyly syndrome, MIM# 175700
  • Pallister-Hall syndrome, MIM# 146510
  • Polydactyly, postaxial, types A1 and B, MIM# 174200
  • Polydactyly, preaxial, type IV, MIM# 174700
Tags
Green Green List (high evidence)
GNAS
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • McCune-Albright syndrome, somatic, mosaic 174800
  • ACTH-independent macronodular adrenal hyperplasia 219080 IC
  • Osseous heteroplasia, progressive 166350
  • Pseudohypoparathyroidism Ic 612462
  • Pseudopseudohypoparathyroidism 612463
  • Pseudohypoparathyroidism Ia 103580
  • Pseudohypoparathyroidism Ib 603233
Tags
Green Green List (high evidence)
GPC3
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
GRIP1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
GSC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, auditory canal atresia, mandibular hypoplasia, skeletal abnormalities, MIM# 602471
Tags
Green Green List (high evidence)
HDAC8
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Wilson-Turner syndrome 309585
  • Cornelia de Lange syndrome 5 300882
Tags
Green Green List (high evidence)
HDAC8
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Cornelia de Lange syndrome 5, MIM# 300882
Tags
Green Green List (high evidence)
HMGB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • brachyphalangy, polydactyly, and tibial aplasia/hypoplasia MIM#163905
Tags
Green Green List (high evidence)
HNRNPK
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HOXA13
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Hand-foot-uterus syndrome, MIM# 140000
Tags
Green Green List (high evidence)
HOXA13
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HOXA13_HFGS_GCN1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Disease associations
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXA13_HFGS_GCN2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Disease associations
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXA13_HFGS_GCN3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Disease associations
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXA13_HFGS_GCN3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Disease associations
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXD13
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Brachydactyly, type E 113300 Brachydactyly, type D, MIM# 113200
  • Syndactyly, type V, MIM# 186300
  • Synpolydactyly 1, MIM# 186000
  • Brachydactyly-syndactyly syndrome, MIM# 610713
Tags
Green Green List (high evidence)
HOXD13
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Disease associations
  • Synpolydactyly 1, MIM# 186000
Tags
Green Green List (high evidence)
HOXD13_SPD1_GCG
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Expert list
Disease associations
  • Synpolydactyly 1 MIM#186000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXD13_SPD1_GCG
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Expert list
Disease associations
  • Synpolydactyly 1 MIM#186000
Tags
  • paediatric-onset
Green Green List (high evidence)
HYLS1
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Hydrolethalus syndrome (MIM#236680)
Tags
  • founder
Green Green List (high evidence)
IFT140
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 9 with or without polydactyly, MIM# 266920
Tags
Green Green List (high evidence)
IFT172
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
IFT27
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IFT43
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IFT52
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 16 with or without polydactyly, MIM# 617102
Tags
Green Green List (high evidence)
IFT80
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IHH
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Brachydactyly, type A1 112500
  • Acrocapitofemoral dysplasia 607778
Tags
Green Green List (high evidence)
IHH upstream regulatory region
IHH upstream regulatory region
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Craniosynostosis, Philadelphia type, with syndactyly, MIM#185900
  • Syndactyly, type 1, MIM#185900
Tags
  • regulatory region
Green Green List (high evidence)
INPP5E
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IQCE
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Polydactyly, postaxial, type A7 MIM#617642
Tags
Green Green List (high evidence)
2q37.3 deletion syndrome
ISCA-37394-Loss
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
  • Expert Review
Disease associations
  • Chromosome 2q37 deletion syndrome, MIM# 600430
  • brachydactyly
  • intellectual disability
Tags
  • SV/CNV
Green Green List (high evidence)
Chromosome 7q36.3 duplication syndrome (SHH cis-regulatory duplication, ZRS)
ISCA-37467-Gain
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Literature
  • Expert Review Green
  • Expert Review Green
Disease associations
  • Syndactyly, type IV, MIM# 186200
  • limb anomalies
  • congenital heart disease
  • congenital anomalies
Tags
  • regulatory region
Green Green List (high evidence)
Chromosome 15q25 deletion syndrome
ISCA-37500-Loss
Region
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Expert list
Disease associations
  • Chromosome 15q25 deletion syndrome MIM#614294
  • intellectual disability
  • congenital abnormalities
  • haematological abnormalities
Tags
Green Green List (high evidence)
KDM6A
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Kabuki syndrome 2 MIM#300867
Tags
Green Green List (high evidence)
KIAA0586
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
KIAA0825
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Polydactyly, postaxial, type A10, MIM# 618498
Tags
Green Green List (high evidence)
KIF7
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
KMT2A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Wiedemann-Steiner syndrome MIM#605130
Tags
Green Green List (high evidence)
KMT2D
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Kabuki syndrome 1 - 147920
Tags
Green Green List (high evidence)
LBR
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Greenberg skeletal dysplasia, MIM# 215140
Tags
Green Green List (high evidence)
LEF1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Ectodermal dysplasia 17 with or without limb malformations, MIM# 621224
Tags
Green Green List (high evidence)
LEF1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Ectodermal dysplasia 17 with or without limb malformations, MIM# 621224
Tags
Green Green List (high evidence)
LMBR1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Disease associations
  • Polydactyly, preaxial type II, MIM# 174500
Tags
Green Green List (high evidence)
LMBR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Laurin-Sandrow syndrome, MIM# 135750
Tags
  • SV/CNV
Green Green List (high evidence)
LRP4
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Sclerosteosis 2 614305
  • Cenani-Lenz syndactyly syndrome 212780
Tags
Green Green List (high evidence)
LTBP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Geleophysic dysplasia 3 617809
  • Dental anomalies and short stature 610216
Tags
Green Green List (high evidence)
LZTFL1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
MAP3K20
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Split-foot malformation with mesoaxial polydactyly MIM#616890
Tags
Green Green List (high evidence)
MAPKAPK5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Neurocardiofaciodigital syndrome, MIM# 619869
Tags
Green Green List (high evidence)
MAX
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Polydactyly-macrocephaly syndrome, MIM# 620712
Tags
Green Green List (high evidence)
MECOM
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 2, OMIM # 616738
  • Radioulnar synostosis without hematological aberration, no OMIM #
Tags
Green Green List (high evidence)
MEGF8
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
MGP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Keutel syndrome 245150
Tags
Green Green List (high evidence)
MKKS
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
MKS1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
MYCN
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Megalencephaly-polydactyly syndrome, MIM# 620748
Tags
Green Green List (high evidence)
MYCN
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Megalencephaly-polydactyly syndrome, MIM# 620748
  • Feingold syndrome (Microcephaly-oculo-digito-esophageal-duodenal) 164280
Tags
Green Green List (high evidence)
NECTIN1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Cleft lip/palate-ectodermal dysplasia syndrome MIM#225060
Tags
Green Green List (high evidence)
NECTIN4
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Ectodermal dysplasia-syndactyly syndrome 1 MIM#613573
Tags
Green Green List (high evidence)
NEK1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 6 with or without polydactyly, MIM# 263520
Tags
Green Green List (high evidence)
NIPBL
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Cornelia de Lange syndrome 1, MIM# 122470
Tags
Green Green List (high evidence)
NIPBL
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Cornelia de Lange syndrome 1 122470
Tags
Green Green List (high evidence)
NOG
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • NOG-related symphalangism spectrum disorder MONDO:0100521
Tags
Green Green List (high evidence)
NOTCH1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Limb, scalp and skull defects
  • AOS
  • Adams-Oliver syndrome 5, 616028
  • Combination of aplasia cutis congenita of the scalp vertex and terminal transverse limb defects (e.g., amputations, syndactyly, brachydactyly, or oligodactyly)
Tags
Green Green List (high evidence)
NPHP3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
NPM1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • radial ray defects
  • short stature
  • nail dsytrophy
  • bone marrow failure
Tags
Green Green List (high evidence)
NSDHL
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • NHS GMS
Disease associations
  • CK syndrome 300831
  • Congenital hemidysplasia, ichthyosis, limb defects (CHILD) syndrome 308050
Tags
Green Green List (high evidence)
NXN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal recessive 2 MIM#618529
Tags
Green Green List (high evidence)
OFD1
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PALB2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group N, MIM# 610832
Tags
Green Green List (high evidence)
PDE3A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hypertension and brachydactyly syndrome, 112410
Tags
Green Green List (high evidence)
PDE4D
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Acrodysostosis 2, with or without hormone resistance 614613
Tags
Green Green List (high evidence)
PGM3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Immunodeficiency 23 615816
Tags
Green Green List (high evidence)
PHF6
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Borjeson-Forssman-Lehmann syndrome MIM#301900
Tags
Green Green List (high evidence)
PIGV
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Hyperphosphatasia with mental retardation syndrome 1 239300
Tags
Green Green List (high evidence)
PIK3CA
2 reviews
Other
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Megalencephaly-capillary malformation (MCAP) syndrome , MIM#602501
Tags
  • somatic
Green Green List (high evidence)
PIK3R2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PITX1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PITX1 upstream regulatory region
PITX1 upstream regulatory region
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Liebenberg syndrome, MIM#186550
Tags
  • regulatory region
Green Green List (high evidence)
POLR1A
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Acrofacial dysostosis, Cincinnati type 616462
Tags
Green Green List (high evidence)
PORCN
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PRKACA
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Cardioacrofacial dysplasia 1, MONDO:0030876
Tags
Green Green List (high evidence)
PRKACB
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Cardioacrofacial dysplasia 2, MONDO:0030877
Tags
Green Green List (high evidence)
PRKAR1A
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Myxoma, intracardiac 255960
  • Acrodysostosis 1, with or without hormone resistance 101800
  • Pigmented nodular adrenocortical disease, primary, 1 610489
Tags
Green Green List (high evidence)
PRMT7
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Short stature, brachydactyly, intellectual developmental disability, and seizures 617157
Tags
Green Green List (high evidence)
PRMT9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
  • Expert Review Green
  • Expert Review Green
Disease associations
  • Neurodevelopmental disorder, MONDO:0700092, PRMT9-related
Tags
Green Green List (high evidence)
PTDSS1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Lenz-Majewski hyperostotic dwarfism 151050
Tags
Green Green List (high evidence)
PTHLH
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Brachydactyly, type E2 613382
Tags
Green Green List (high evidence)
RAB23
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RAB34
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Orofaciodigital syndrome 20, MIM#620718
Tags
Green Green List (high evidence)
RAB34
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Orofaciodigital syndrome 20, MIM#620718
Tags
Green Green List (high evidence)
RAD21
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Cornelia de Lange syndrome 4, MIM# 614701
Tags
Green Green List (high evidence)
RAD21
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Cornelia de Lange syndrome 4 614701
Tags
Green Green List (high evidence)
RAD51C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anemia, complementation group O, MIM# 613390
Tags
Green Green List (high evidence)
RBM10
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RBM8A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Thrombocytopenia-absent radius syndrome 274000
Tags
Green Green List (high evidence)
RBM8A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Thrombocytopenia-absent radius syndrome, MIM# 274000
Tags
  • SV/CNV
Green Green List (high evidence)
RBPJ
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Adams-Oliver syndrome 3, 614814
Tags
Green Green List (high evidence)
RECQL4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Baller-Gerold syndrome, MIM# 218600
  • RAPADILINO syndrome, MIM# 266280
  • Rothmund-Thomson syndrome, type 2,MIM# 268400
Tags
Green Green List (high evidence)
RECQL4
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Rothmund-Thomson syndrome 268400
  • RAPILINO syndrome 266280
  • Baller-Gerold syndrome 218600
Tags
Green Green List (high evidence)
ROR2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal recessive 268310
  • Brachydactyly, type B1 113000
Tags
Green Green List (high evidence)
RPGRIP1L
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RPL11
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 7, MIM# 612562
  • MONDO:0012938
Tags
Green Green List (high evidence)
RPL15
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Diamond-Blackfan anemia 12, MIM# 615550
Tags
Green Green List (high evidence)
RPL26
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 11, MIM# 614900
Tags
Green Green List (high evidence)
RPL35A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 5, MIM# 612528
  • MONDO:0012925
Tags
  • SV/CNV
Green Green List (high evidence)
RPL5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 6, MIM# 612561
  • MONDO:0012937
Tags
Green Green List (high evidence)
RPS10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anemia 9, MIM# 613308
  • MONDO:0013216
Tags
Green Green List (high evidence)
RPS17
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 4, MIM# 612527
  • MONDO:0012924
Tags
Green Green List (high evidence)
RPS19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 1, MIM# 105650
  • MONDO:0007110
Tags
Green Green List (high evidence)
RPS24
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-blackfan anaemia 3, MIM# 610629
  • MONDO:0012529
Tags
Green Green List (high evidence)
RPS26
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 10, MIM# 613309
  • MONDO:0013217
Tags
Green Green List (high evidence)
RPS7
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anaemia 8, MIM# 612563
  • MONDO:0012939
Tags
Green Green List (high evidence)
S1PR2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Disease associations
  • Sensorineural hearing loss disorder MONDO:0020678, S1PR2-related
  • Congenital limb malformation, MONDO:0019054, S1PR2-related
Tags
Green Green List (high evidence)
SALL1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Townes-Brocks syndrome 1, MIM#107480
  • MONDO:0054581
Tags
Green Green List (high evidence)
SALL1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SALL4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Duane-radial ray syndrome, MIM# 607323
  • MONDO:0011812
  • IVIC syndrome, MIM# 147750
  • MONDO:0007836
Tags
Green Green List (high evidence)
SALL4
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SC5D
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SCNM1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Literature
Disease associations
  • Orofaciodigital syndrome 19, MONDO:0859310
Tags
Green Green List (high evidence)
SETD5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Intellectual developmental disorder, autosomal dominant 23 (MIM#615761)
Tags
Green Green List (high evidence)
SETD5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Intellectual developmental disorder, autosomal dominant 23 (MIM#615761)
Tags
Green Green List (high evidence)
SF3B4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Acrofacial dysostosis 1, Nager type 154400
Tags
Green Green List (high evidence)
SF3B4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Acrofacial dysostosis 1, Nager type, MIM# 154400
Tags
Green Green List (high evidence)
SHH
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SHOX
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Leri-Weill dyschondrosteosis, MIM# 127300
  • Langer mesomelic dysplasia, MIM#249700
Tags
Green Green List (high evidence)
SHOX downstream regulatory region
SHOX downstream regulatory region
Region
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Leri-Weill dyschondrosteosis (MIM#127300)
  • Short stature, idiopathic familial (MIM#300582)
Tags
  • regulatory region
Green Green List (high evidence)
SLX4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia, complementation group P, MIM# 613951
  • MONDO:0013499
Tags
Green Green List (high evidence)
SMAD4
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Myhre syndrome 139210
Tags
Green Green List (high evidence)
SMARCA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Nicolaides-Baraitser syndrome MIM#601358
Tags
Green Green List (high evidence)
SMARCA4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Coffin-Siris syndrome 4 MIM#614609
Tags
Green Green List (high evidence)
SMARCB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Coffin-Siris syndrome 3 MIM#614608
Tags
Green Green List (high evidence)
SMARCE1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Coffin-Siris syndrome 5 MIM#616938
Tags
Green Green List (high evidence)
SMC1A
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Cornelia de Lange syndrome 2 300590
Tags
Green Green List (high evidence)
SMC1A
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Cornelia de Lange syndrome 2, MIM# 300590
Tags
Green Green List (high evidence)
SMC3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Cornelia de Lange syndrome 3 610759
Tags
Green Green List (high evidence)
SMC3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Cornelia de Lange syndrome 3, MIM# 610759
Tags
Green Green List (high evidence)
SMO
3 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Microcephaly, congenital heart disease, polydactyly, aganglionosis
  • Pallister-Hall-like syndrome , MIM#241800
  • Curry-Jones syndrome, somatic mosaic 601707
Tags
Green Green List (high evidence)
SMOC1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SOST
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Van Buchem disease 239100
  • Sclerosteosis 1 269500
  • Craniodiaphyseal dysplasia, autosomal dominant 122860
Tags
Green Green List (high evidence)
SOX9
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Campomelic dysplasia with autosomal sex reversal 114290
Tags
Green Green List (high evidence)
SPINT2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Diarrhoea 3, secretory sodium, congenital, syndromic, MIM# 270420
  • MONDO:0010036
Tags
  • founder
Green Green List (high evidence)
TBX15
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Cousin syndrome 260660
Tags
Green Green List (high evidence)
TBX3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Ulnar-mammary syndrome, MIM# 181450
  • MONDO:0008411
Tags
Green Green List (high evidence)
TBX3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TBX5
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TBX5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Holt-Oram syndrome, MIM# 142900
Tags
Green Green List (high evidence)
TCTN2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 24, MIM# 616654
  • MONDO:0014724
  • Meckel syndrome 8, MIM# 613885
  • MONDO:0013482
Tags
Green Green List (high evidence)
TCTN3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TFAP2A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TFAP2B
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TGDS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Catel-Manzke syndrome 616145
Tags
Green Green List (high evidence)
TMEM107
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Meckel syndrome 13 MIM#617562
  • Orofaciodigital syndrome XVI MIM#617563
Tags
Green Green List (high evidence)
TMEM138
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMEM17
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Meckel syndrome MONDO:0018921, TMEM17-related
Tags
Green Green List (high evidence)
TMEM216
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMEM231
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMEM237
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 14, MIM# 614424
Tags
Green Green List (high evidence)
TMEM67
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TP63
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations, MONDO:1040001
Tags
Green Green List (high evidence)
TRAF3IP1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Senior-Loken syndrome 9, MIM# 616629
  • MONDO:0014712
Tags
Green Green List (high evidence)
TRPS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Trichorhinophalangeal syndrome, type III 190351
  • Trichorhinophalangeal syndrome, type I 190350
Tags
Green Green List (high evidence)
TRPV4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Expert Review Green
Disease associations
  • Parastremmatic dwarfism 168400
  • Metatropic dysplasia 156530
  • Spinal muscular atrophy, distal, congenital nonprogressive 600175
  • Scapuloperoneal spinal muscular atrophy 181405
  • SED, Maroteaux type 184095
  • Spondylometaphyseal dysplasia, Kozlowski type 184252
  • Hereditary motor and sensory neuropathy, type IIc 606071
  • Brachyolmia type 3 113500
  • Digital arthropathy-brachydactyly, familial 606835
Tags
Green Green List (high evidence)
TTC21B
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TTC8
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 8, MIM# 615985
Tags
Green Green List (high evidence)
TWIST1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow-Sorauf syndrome, MIM# 180750
Tags
Green Green List (high evidence)
UBA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Disease associations
  • ACCES syndrome, MIM# 619959
  • Split-Hand/Foot Malformation
  • Aplasia Cutis Congenita
  • Ectrodactyly
Tags
Green Green List (high evidence)
UBE2T
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Fanconi anemia, complementation group T, MIM# 616435
Tags
  • SV/CNV
Green Green List (high evidence)
UBE3B
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Kaufman oculocerebrofacial syndrome, MIM# 244450
  • MONDO:0009485
Tags
Green Green List (high evidence)
USP9X
2 reviews
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Intellectual developmental disorder 99 MIM#300919
  • syndromic, female-restricted Intellectual developmental disorder 99 MIM#300968
Tags
Green Green List (high evidence)
VCP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Literature
Disease associations
  • Adams-Oliver syndrome MONDO:0007034, VCP-related
Tags
Green Green List (high evidence)
WDPCP
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 15, MIM# 615992
  • OFD
  • Congenital heart defects, hamartomas of tongue, and polysyndactyly, 217085
Tags
Green Green List (high evidence)
WDR19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
WDR35
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Cranioectodermal dysplasia 2, MIM#613610
  • MONDO:0013323
  • Short-rib thoracic dysplasia 7 with or without polydactyly, MIM#614091
  • MONDO:0013569
Tags
Green Green List (high evidence)
WNT10B
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Split-hand/foot malformation 6 225300
Tags
Green Green List (high evidence)
WNT5A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal dominant 1 180700
Tags
Green Green List (high evidence)
WNT7A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • Fuhrmann syndrome, MIM# 228930
  • Ulna and fibula, absence of, with severe limb deficiency, MIM# 276820
Tags
Green Green List (high evidence)
WNT7A
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Santos syndrome, MIM# 613005
  • Fuhrmann syndrome 228930
Tags
Green Green List (high evidence)
ZIC3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Disease associations
  • VACTERL association, X-linked 314390
Tags
Green Green List (high evidence)
ZRSR2
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Orofaciodigital syndrome XXI, MIM# 301132
Tags
Green Green List (high evidence)
ZSWIM6
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Amber Amber List (moderate evidence)
CD96
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Genetic Health Queensland
  • Victorian Clinical Genetics Services
Disease associations
  • C syndrome, MIM#211750
Tags
Amber Amber List (moderate evidence)
CHUK
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • ?Popliteal pterygium syndrome, Bartsocas-Papas type 2 MIM#619339
  • Cocoon syndrome MIM#613630
Tags
Amber Amber List (moderate evidence)
EFCAB7
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Polydactyly (MONDO:0021003), EFCAB7-related
Tags
Amber Amber List (moderate evidence)
FMN1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Disease associations
  • oligosyndactyly
  • radioulnar synostosis
  • hearing loss
  • renal defects
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
HDAC4
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Albright hereditary osteodystrophy-like syndrome
  • Brachydactyly-intellectual disability
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
HOXD12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Other
Disease associations
  • Clubfoot (non-syndromic) MONDO:0007342
Tags
Amber Amber List (moderate evidence)
IFT57
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Bardet-Bield syndrome
  • ciliopathy - MONDO:0005308
Tags
Amber Amber List (moderate evidence)
PDE6D
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 22, OMIM #615665
Tags
Amber Amber List (moderate evidence)
RAD51
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert Review
Disease associations
  • Fanconi anaemia, complementation group R, MIM# 617244
Tags
Amber Amber List (moderate evidence)
RFWD3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Fanconi anemia MONDO:0019391
Tags
Amber Amber List (moderate evidence)
RPS29
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond-Blackfan anemia 13, MIM# 615909
Tags
Amber Amber List (moderate evidence)
SLC30A7
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Joubert syndrome (MONDO:0018772), SLC30A7-related
Tags
Amber Amber List (moderate evidence)
TOPORS
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • MONDO:0005308
  • ciliopathy
  • postaxial polydactyly
  • multiple lingual hamartomas
  • dysmorphic features
Tags
Red Red List (low evidence)
AHI1
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 3, MIM# 608629
Tags
Red Red List (low evidence)
ALMS1
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Alstrom syndrome, MIM#203800
Tags
Red Red List (low evidence)
ALX3
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Genetic Health Queensland
  • Victorian Clinical Genetics Services
Disease associations
  • Frontonasal dysplasia 1, MIM#136760
Tags
Red Red List (low evidence)
ARMC8
2 reviews
2 red
Unknown
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DACT1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • NHS GMS
Disease associations
  • ?Townes-Brocks syndrome 2 (OMIM #617466)
Tags
Red Red List (low evidence)
DLX6
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Disease associations
  • Split-hand/foot malformation 1 183600
Tags
Red Red List (low evidence)
FANCM
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Fanconi anaemia
Tags
  • refuted
Red Red List (low evidence)
FBLN1
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Synpolydactyly, 3/3'4, associated with metacarpal and metatarsal synostoses 608180
Tags
Red Red List (low evidence)
FBXW4
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Expert list
Disease associations
  • Split-hand/foot malformation 3 syndrome 246560
Tags
Red Red List (low evidence)
GATA1
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
IFT57
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • ?Orofaciodigital syndrome XVIII MIM#617927
Tags
Red Red List (low evidence)
LRP4
2 reviews
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Cenani-Lenz syndactyly syndrome, MIM# 212780
  • Sclerosteosis 2, MIM# 614305
Tags
Red Red List (low evidence)
LTBP2
2 reviews
1 green 1 red
Unknown
Sources
  • Expert Review Red
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Weill-Marchesani
Tags
Red Red List (low evidence)
MBTPS2
2 reviews
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PNPLA6
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Laurence-Moon syndrome - MIM#245800
  • Boucher-Neuhauser syndrome - MIM#215470
  • Oliver-McFarlane syndrome - #275400
  • Spastic paraplegia 39, autosomal recessive - #612020
Tags
Red Red List (low evidence)
PROM1
2 reviews
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Cone-rod dystrophy 12, MIM# 612657
  • Macular dystrophy, retinal, 2, MIM# 608051
  • Retinitis pigmentosa 41, MIM# 612095
  • Stargardt disease 4, MIM# 603786
Tags
Red Red List (low evidence)
RPS28
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Diamond Blackfan anemia 15 with mandibulofacial dysostosis, MIM# 606164
Tags
Red Red List (low evidence)
SDCCAG8
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 16, MIM# 615993
Tags
Red Red List (low evidence)
TBX22
2 reviews
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Cleft palate with ankyloglossia, MIM# 303400
  • Abruzzo-Erickson syndrome, MIM# 302905
Tags
Red Red List (low evidence)
TRIM32
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 11, MIM# 615988
Tags
Red Red List (low evidence)
WNT3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
  • Victorian Clinical Genetics Services
Disease associations
  • Tetra-amelia syndrome 273395
Tags
Red Red List (low evidence)
ZIC3_VACTERLX_GCC
STR
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
  • Literature
Disease associations
  • VACTERL association, X-linked MIM#314390
Tags
  • paediatric-onset
Red Red List (low evidence)
ZNF141
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly, postaxial, type A6, MIM# 615226
Tags

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