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Fetal anomalies v2.0 LOXL3 Gene migrated from ENSG00000115318 to ENSG00000115318 (gene set migration)
Fetal anomalies v1.461 LOXL3 Zornitza Stark Phenotypes for gene: LOXL3 were changed from Stickler syndrome; cleft lip/palate to Stickler syndrome, MONDO:0019354, LOXL3-related
Fetal anomalies v1.460 LOXL3 Zornitza Stark Publications for gene: LOXL3 were set to 25663169; 26307084; 26957899; 29802726; 30362103; 34787502
Fetal anomalies v1.459 LOXL3 Zornitza Stark Classified gene: LOXL3 as Green List (high evidence)
Fetal anomalies v1.459 LOXL3 Zornitza Stark Gene: loxl3 has been classified as Green List (High Evidence).
Fetal anomalies v1.458 LOXL3 Zornitza Stark reviewed gene: LOXL3: Rating: GREEN; Mode of pathogenicity: None; Publications: 41052910; Phenotypes: Stickler syndrome, MONDO:0019354, LOXL3-related; Mode of inheritance: BIALLELIC, autosomal or pseudoautosomal
Fetal anomalies v0.3912 LOXL3 Zornitza Stark Marked gene: LOXL3 as ready
Fetal anomalies v0.3912 LOXL3 Zornitza Stark Gene: loxl3 has been classified as Amber List (Moderate Evidence).
Fetal anomalies v0.3912 LOXL3 Zornitza Stark Classified gene: LOXL3 as Amber List (moderate evidence)
Fetal anomalies v0.3912 LOXL3 Zornitza Stark Gene: loxl3 has been classified as Amber List (Moderate Evidence).
Fetal anomalies v0.3908 LOXL3 Krithika Murali gene: LOXL3 was added
gene: LOXL3 was added to Fetal anomalies. Sources: Literature
Mode of inheritance for gene: LOXL3 was set to BIALLELIC, autosomal or pseudoautosomal
Publications for gene: LOXL3 were set to 25663169; 26307084; 26957899; 29802726; 30362103; 34787502
Phenotypes for gene: LOXL3 were set to Stickler syndrome; cleft lip/palate
Review for gene: LOXL3 was set to AMBER
Added comment: Biallelic variants reported in association with Stickler syndrome in 2 unrelated families. Also identified in one individual with non-syndromic Pierre Robin sequence who had a CNV also.

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PMID 34787502 Sood et al 2021 - proband with non-syndromic Pierre Robin sequence - homozygous missense LOXL3 variant identified. Sibling also had non-syndromic PRS, but genetic testing declined by family. In addition 551 kb chr10q26.2 duplication identified, no parental testing information provided, not previously reported to be associated with CL/P.

PMID 30362103 Chan et al 2019 - report father and son with Stickler syndrome and homozygous LOXL3 missense variants. Predominantly ocular phenotype with no antenatal features reported.

PMID: 29802726 Khan et al 2018 - genotyping of 258 probands with non-syndromic cleft palate (nsCP) and their parents, focusing in particular on common missense variant p.Ile615Phe. Identified four Phe/Phe homozygotes, report significant association between infant’s homozygote Phe/Phe genotype and the risk of nsCP, compared to common Ile/Ile homozygotes

PMID 26957899 Li et al 2016 - A homozygous frameshift mutation (c.39dup; p.L14Afs*21) and a compound heterozygous frameshift mutation (c.39dup; p.L14Afs*21 and c.594delG; p.Q199Kfs*35) in LOXL3 were separately identified in two of 298 probands with early-onset high myopia.

PMID: 26307084 Zhang et al 2015 - Mice lacking LOXL3 exhibited perinatal lethality and were noted to have cleft palate and spinal deformity.

PMID: 25663169 Alzahrani et al 2015 - homozygous variant identified in 2 children with Stickler syndrome from the same family, both children had cleft lip/palate.
Sources: Literature