Description
This panel contains genes associated with pituitary hormone deficiency. 
Includes isolated hormone deficiency, combined hormone deficiencies, and panhypopituitarism.

It has been compared against the Genomics England PanelApp 'Pituitary hormone deficiency' panel V4.1, with all discrepancies reviewed and resolved (November 2025).

16 reviewers

  • Natasha Brown (Victorian Clinical Genetics Services)

  • Belinda Chong (Victorian Clinical Genetics Services)

  • Lauren Akesson (Royal Melbourne Hospital)

  • Paul De Fazio (Victorian Clinical Genetics Services)

  • Rylee Peters (Victorian Clinical Genetics Services)

  • Teresa Zhao (Victorian Clinical Genetics Services)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Michelle Torres (Victorian Clinical Genetics Services)

  • Chirag Patel (Genetic Health Queensland)

  • Seb Lunke (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Lucy Spencer (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services)

  • Krithika Murali (Victorian Clinical Genetics Services)

103 Entities

103 reviewed, 63 green

List Entity Reviews Mode of inheritance Details
103 Entitiess
Green Green List (high evidence)
ANOS1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 1 with or without anosmia (Kallmann syndrome 1), MIM# 308700
Tags
Green Green List (high evidence)
ARHGAP35
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism, MONDO:0015770, ARHGAP35-related
Tags
Green Green List (high evidence)
BMP4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Microphthalmia, syndromic 6, MIM#607932
Tags
Green Green List (high evidence)
BRAF
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Cardiofaciocutaneous syndrome, MONDO:0015280
Tags
Green Green List (high evidence)
BTK
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Isolated growth hormone deficiency, type III, with agammaglobulinemia (307200)
Tags
Green Green List (high evidence)
CHD7
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypogonadotropic hypogonadism 5 with or without anosmia (612370)
  • CHARGE syndrome (214800)
Tags
Green Green List (high evidence)
CUL4B
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Mental retardation, X-linked, syndromic 15 (Cabezas type) 300354
Tags
Green Green List (high evidence)
DCAF17
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Woodhouse-Sakati syndrome, MIM# 241080
Tags
Green Green List (high evidence)
EIF2S3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Genetic Health Queensland
Phenotypes
  • MEHMO syndrome, MIM# 300148
Tags
Green Green List (high evidence)
FGF17
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
FGF8
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 6 with or without anosmia (612702)
Tags
Green Green List (high evidence)
FGFR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypogonadotropic hypogonadism 2 with or without anosmia 147950
Tags
Green Green List (high evidence)
FOXA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypopituitarism, MONDO:0005152
  • Hyperinsulinism, MONDO:0002177
Tags
Green Green List (high evidence)
FSHB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 24 without anosmia, MIM#229070
Tags
Green Green List (high evidence)
GH1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Growth hormone deficiency, isolated, type IA (262400)
  • Growth hormone deficiency, isolated, type IB (612781)
  • Growth hormone deficiency, isolated, type II (173100)
Tags
Green Green List (high evidence)
GHR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Growth hormone insensitivity, partial (604271)
  • Increased responsiveness to growth hormone (604271)
  • Laron dwarfism (262500)
Tags
Green Green List (high evidence)
GHRHR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Growth hormone deficiency, isolated, type IV (618157)
Tags
Green Green List (high evidence)
GLI2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Culler-Jones syndrome (615849)
  • Holoprosencephaly 9 (610829)
Tags
Green Green List (high evidence)
GLI3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Greig cephalopolysyndactyly syndrome (175700)
  • Pallister-Hall syndrome (146510)
Tags
Green Green List (high evidence)
GNAI2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Syndromic disease MONDO:0002254, GNAI2-related
Tags
Green Green List (high evidence)
GNRH1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 12 with or without anosmia, MIM# 614841
Tags
Green Green List (high evidence)
GNRHR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 7 without anosmia (146110)
Tags
Green Green List (high evidence)
HAMP
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemochromatosis, type 2B, MIM# 613313
Tags
Green Green List (high evidence)
HESX1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Growth hormone deficiency with pituitary anomalies (182230)
  • Pituitary hormone deficiency, combined, 5 (182230)
Tags
Green Green List (high evidence)
HFE
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemochromatosis, MIM# 235200
Tags
Green Green List (high evidence)
HFE2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hemochromatosis, type 2A, MIM# 602390
Tags
  • new gene name
Green Green List (high evidence)
HID1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 105 with hypopituitarism MIM#619983
Tags
Green Green List (high evidence)
IGSF1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypothyroidism, central, and testicular enlargement, MIM# 300888
Tags
Green Green List (high evidence)
KISS1R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 8 with or without anosmia (MIM#614837)
Tags
Green Green List (high evidence)
KLB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism
Tags
Green Green List (high evidence)
LHB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 23 with or without anosmia (MIM#228300)
Tags
Green Green List (high evidence)
LHX3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Pituitary hormone deficiency, combined, 3 (221750)
Tags
  • treatable
Green Green List (high evidence)
LHX4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Pituitary hormone deficiency, combined, 4 (262700)
Tags
  • treatable
Green Green List (high evidence)
NOS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism, MONDO:0018555
Tags
Green Green List (high evidence)
NR0B1
3 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Adrenal hypoplasia, congenital (MIM# 300200)
Tags
  • SV/CNV
Green Green List (high evidence)
OTX2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Pituitary hormone deficiency, combined, 6 (613986)
  • Microphthalmia, syndromic 5 (610125)
Tags
Green Green List (high evidence)
PITX2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Anterior segment dysgenesis 4 (137600)
  • Axenfeld-Rieger syndrome, type 1 (180500)
Tags
Green Green List (high evidence)
PLXNA3
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism
Tags
Green Green List (high evidence)
PNPLA6
4 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Oliver-McFarlane syndrome (275400)
  • Spastic paraplegia 39, autosomal recessive (612020)
  • Boucher-Neuhauser syndrome (215470)
Tags
Green Green List (high evidence)
POLR3A
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism (607694)
Tags
Green Green List (high evidence)
POLR3B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Leukodystrophy, hypomyelinating, 8, with or without oligodontia and/or hypogonadotropic hypogonadism
  • OMIM #614381
Tags
Green Green List (high evidence)
POU1F1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Pituitary hormone deficiency, combined, 1 MIM# 613038
  • pituitary hypoplasia
  • severe growth failure
  • combined GH, PRL and TSH deficiency
  • distinct facial features (prominent forehead, mid-facial hypoplasia, depressed nasal bridge, deep-set eyes and a short nose with anteverted nostrils)
Tags
Green Green List (high evidence)
PROK2
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 4 with or without anosmia (MIM#610628)
Tags
Green Green List (high evidence)
PROKR2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypogonadotropic hypogonadism 3 with or without anosmia (244200)
Tags
Green Green List (high evidence)
PROP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Pituitary hormone deficiency, combined, 2 MIM# 262600
Tags
Green Green List (high evidence)
RNPC3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Growth hormone deficiency
  • Intellectual disability
Tags
Green Green List (high evidence)
ROBO1
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pituitary hormone deficiency, combined or isolated, 8, MIM# 620303
Tags
Green Green List (high evidence)
SEMA3A
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Hypogonadotropic hypogonadism 16 with or without anosmia - MIM#614897
Tags
Green Green List (high evidence)
SEMA3F
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism
Tags
Green Green List (high evidence)
SLC29A3
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Histiocytosis-lymphadenopathy plus syndrome, MIM# 602782
Tags
Green Green List (high evidence)
SLC40A1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemochromatosis, type 4, MIM# 606069
Tags
Green Green List (high evidence)
SOX10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Kallman syndrome
  • PCWH syndrome (MIM#609136)
  • Waardenburg syndrome, type 2E, with or without neurologic involvement (MIM#611584)
  • Waardenburg syndrome, type 4C (MIM#613266)
Tags
Green Green List (high evidence)
SOX2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Microphthalmia, syndromic 3, MIM# 206900
Tags
Green Green List (high evidence)
SOX3
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Panhypopituitarism, X-linked (312000)
  • Mental retardation, X-linked, with isolated growth hormone deficiency (300123)
Tags
  • SV/CNV
Green Green List (high evidence)
TAC3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 10 with or without anosmia (MIM#614839)
Tags
Green Green List (high evidence)
TACR3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hypogonadotropic hypogonadism 11 with or without anosmia, MIM# 614840
Tags
Green Green List (high evidence)
TBC1D32
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Syndromic hypopituitarism
Tags
Green Green List (high evidence)
TBL1X
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypothyroidism, congenital, nongoitrous, 8 MIM#301033
Tags
Green Green List (high evidence)
TBX19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Adrenocorticotropic hormone deficiency, 201400
Tags
Green Green List (high evidence)
TCF12
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism 26 with or without anosmia, MIM# 619718
  • Kallmann syndrome
Tags
Green Green List (high evidence)
TFR2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemochromatosis, type 3 (MIM#604250)
Tags
Green Green List (high evidence)
WDR11
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert List
  • Expert Review Green
  • Genomics England PanelApp
Phenotypes
  • Hypogonadotropic hypogonadism 14 with or without anosmia (614858)
Tags
Green Green List (high evidence)
ZRSR2
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Orofaciodigital syndrome XXI, MIM# 301132
Tags
Amber Amber List (moderate evidence)
ARNT2
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Genetic Health Queensland
  • Genomics England PanelApp
  • Literature
Phenotypes
  • Webb-Dattani syndrome 615926
Tags
Amber Amber List (moderate evidence)
CCDC141
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • congenital hypogonadotropic hypogonadism, MONDO:0015770, CCDC141-related
Tags
Amber Amber List (moderate evidence)
CDON
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • Holoprosencephaly 11 (614226)
Tags
Amber Amber List (moderate evidence)
CLPP
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Perrault syndrome 3, MIM# 614129
Tags
Amber Amber List (moderate evidence)
ESRP2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Cleft palate, MONDO:0016064
  • Hypopituitarism MONDO:0005152
Tags
Amber Amber List (moderate evidence)
FEZF1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 22, with or without anosmia 616030
Tags
Amber Amber List (moderate evidence)
GHSR
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • Growth hormone deficiency, isolated partial (615925)
Tags
Amber Amber List (moderate evidence)
KCNQ1
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • Hypopituitarism, MONDO:0005152
  • Long QT syndrome 1 (192500)
Tags
Amber Amber List (moderate evidence)
KISS1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Hypogonadotropic hypogonadism 13 with or without anosmia, MIM# 614842
Tags
Amber Amber List (moderate evidence)
NDNF
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hypogonadotropic hypogonadism 25 with anosmia MIM#618841
Tags
Amber Amber List (moderate evidence)
PRDM13
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cerebellar dysfunction, impaired intellectual development, and hypogonadotropic hypogonadism, MIM# 619761
Tags
  • founder
Amber Amber List (moderate evidence)
RAX
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Microphthalmia, syndromic 16, MIM#611038
Tags
Amber Amber List (moderate evidence)
RBM28
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • ANE syndrome
  • Alopecia, neurologic defects, and endocrinopathy syndrome (612079)
Tags
Amber Amber List (moderate evidence)
SHH
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • Hypopituitarism, MONDO:0005152
  • Microphthalmia with coloboma 5 (611638)
  • Holoprosencephaly 3 (142945)
Tags
Amber Amber List (moderate evidence)
SPRY4
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Hypogonadotropic hypogonadism 17 with or without anosmia, MIM# 615266
Tags
  • disputed
Amber Amber List (moderate evidence)
TGIF1
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Genomics England PanelApp
Phenotypes
  • Holoprosencephaly 4, MONDO:0007734
Tags
Red Red List (low evidence)
AXL
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Red
Phenotypes
  • Hypogonadotropic hypogonadism, MONDO:0018555, AXL-related
Tags
Red Red List (low evidence)
BMP2
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies (617877)
Tags
Red Red List (low evidence)
DUSP6
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 19 with or without anosmia - MIM#615269
Tags
Red Red List (low evidence)
FLRT3
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 21 with anosmia (MIM# 615271)
Tags
Red Red List (low evidence)
FOXH1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Holoprosencephaly
  • No OMIM number
Tags
Red Red List (low evidence)
GHRH
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • No OMIM number
  • ?Isolated growth hormone deficiency due to defect in GHRF
Tags
Red Red List (low evidence)
GPR161
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Pituitary stalk interruption syndrome MONDO:0019828, GPR161-related
Tags
Red Red List (low evidence)
HHIP
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • No OMIM number
Tags
Red Red List (low evidence)
HNRNPU
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genetic Health Queensland
  • Genomics England PanelApp
Phenotypes
  • Epileptic encephalopathy, early infantile, 54 (617391)
Tags
Red Red List (low evidence)
HS6ST1
1 review
1 red
Other
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • {Hypogonadotropic hypogonadism 15 with or without anosmia} 614880
Tags
Red Red List (low evidence)
IL17RD
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypogonadotropic hypogonadism 18 with or without anosmia, MIM# 615267
Tags
  • disputed
Red Red List (low evidence)
NHLH2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Red
Phenotypes
  • Hypogonadotropic hypogonadism 27 without anosmia , MIM# 619755
Tags
Red Red List (low evidence)
NODAL
3 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Heterotaxy, visceral, 5 (270100)
Tags
Red Red List (low evidence)
NSMF
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • Hypogonadotropic hypogonadism 9 with or without anosmia, MIM# 614838
Tags
Red Red List (low evidence)
PAX6
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Aniridia (106210)
Tags
Red Red List (low evidence)
PSTPIP1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Holoprosencephaly
  • Pyogenic sterile arthritis, pyoderma gangrenosum, and acne (604416)
Tags
Red Red List (low evidence)
PTCH1
3 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Holoprosencephaly 7 (610828)
Tags
Red Red List (low evidence)
SEMA3E
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Red
Phenotypes
  • ?CHARGE syndrome (MIM#214800)
Tags
Red Red List (low evidence)
SIX3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Holoprosencephaly 2 (157170)
  • Non-acquired combined pituitary hormone deficiency MONDO:0018762
Tags
Red Red List (low evidence)
SLC15A4
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • No OMIM number
Tags
Red Red List (low evidence)
SLC20A1
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Bladder-Exstrophy-Epispadias Complex (BEEC)
Tags
Red Red List (low evidence)
TCF7L1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
Phenotypes
  • Combined pituitary deficiencies, genetic form, MONDO:0013099, TCF7L1-related
Tags
Red Red List (low evidence)
ZIC2
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Holoprosencephaly 5 (609637)
Tags
Red Red List (low evidence)
ZSWIM6
3 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Red
  • Genomics England PanelApp
  • Victorian Clinical Genetics Services
Phenotypes
  • Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features (617865)
  • Acromelic frontonasal dysostosis (603671)
Tags

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